RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 F5H5T6 163 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 PCDHGA12O60330 932 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 IGHV4-34P06331 123 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 KRT3P12035 628 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 TACR2P21452 398 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 FLT3P36888 993 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 PRKCIP41743 596 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 CTSKP43235 329 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 CXCR3P49682 368 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 IL9RQ01113 521 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 PTP4A2Q12974 167 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 KCNT1Q5JUK3 1230 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 BRMS1LQ5PSV4 323 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 KIAA0895LQ68EN5 471 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 PHLDB2Q86SQ0 1253 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 MFN1Q8IWA4 741 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 LGI2Q8N0V4 545 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 SYN2Q92777 582 aaPredicted RBP16.48■□□□□ 0.23
VAPA-204ENST00000577901 TTC17Q96AE7 1141 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 LMLNQ96KR4 655 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 TBCBQ99426 244 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 SELENOOQ9BVL4 669 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 PABPC3Q9H361 631 aaKnown RBP16.48■□□□□ 0.23
VAPA-204ENST00000577901 CAPN11Q9UMQ6 739 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 SCML1Q9UN30 329 aa16.48■□□□□ 0.23
VAPA-204ENST00000577901 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.23
VAPA-204ENST00000577901 TRABD2BA6NFA1 517 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 FAM47DPA6NHR8 397 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 PDGFRAP16234 1089 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 SDC4P31431 198 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 GSCP56915 257 aaPredicted RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 ST8SIA6P61647 398 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 RPS24P62847 133 aaKnown RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 ZBED6P86452 979 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 CYP4F3Q08477 520 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 INAVAQ3KP66 663 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 SOWAHCQ53LP3 525 aaPredicted RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 CCDC157Q569K6 752 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 RABGAP1LQ5R372 815 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 ACBD5Q5T8D3 534 aaPredicted RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 USP30Q70CQ3 517 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 CFAP52Q8N1V2 620 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 CARNMT1Q8N4J0 409 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 C3orf20Q8ND61 904 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 FIBINQ8TAL6 211 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 CPLX3Q8WVH0 158 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 MYO19Q96H55 970 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 VCPIP1Q96JH7 1222 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 CFAP57Q96MR6 1250 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 PRICKLE1Q96MT3 831 aaPredicted RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 ACE2Q9BYF1 805 aaPredicted RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 TKTL2Q9H0I9 626 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 SCUBE2Q9NQ36 999 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 PIGVQ9NUD9 493 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 FBXL12Q9NXK8 326 aa16.47■□□□□ 0.23
VAPA-204ENST00000577901 LUC7L2Q9Y383 392 aaKnown RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 BZW2Q9Y6E2 419 aaKnown RBP16.47■□□□□ 0.23
VAPA-204ENST00000577901 ITIH6Q6UXX5 1313 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 FAM149AA5PLN7 773 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 ANKRD62A6NC57 917 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 SIGLEC16A6NMB1 481 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 VILLO15195 856 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 DFNA5O60443 496 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 RNASEH1O60930 286 aaKnown RBP16.46■□□□□ 0.23
VAPA-204ENST00000577901 SIN3BO75182 1162 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 PAGE1O75459 146 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 ASLP04424 464 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 CSKP41240 450 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 C21orf59P57076 290 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 RACK1P63244 317 aaKnown RBP16.46■□□□□ 0.23
VAPA-204ENST00000577901 CAMK2BQ13554 666 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 CDH18Q13634 790 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 SMAD1Q15797 465 aaKnown RBP16.46■□□□□ 0.23
VAPA-204ENST00000577901 TTC39BQ5VTQ0 682 aaPredicted RBP16.46■□□□□ 0.23
VAPA-204ENST00000577901 MON1BQ7L1V2 547 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 ZNF571Q7Z3V5 609 aaPredicted RBP16.46■□□□□ 0.23
VAPA-204ENST00000577901 EMC1Q8N766 993 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 RXFP2Q8WXD0 754 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 LRIG1Q96JA1 1093 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 MRGPRX3Q96LB0 322 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 SLC6A18Q96N87 628 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 PRMT1Q99873 361 aaKnown RBP16.46■□□□□ 0.23
VAPA-204ENST00000577901 SYT11Q9BT88 431 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 ARHGEF38Q9NXL2 777 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 FTSJ1Q9UET6 329 aa16.46■□□□□ 0.23
VAPA-204ENST00000577901 A0A1W2PPC4 97 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 TMCO5BA8MYB1 307 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 LUC7L3O95232 432 aaKnown RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 GZMAP12544 262 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 SKILP12757 684 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 TFE3P19532 575 aaPredicted RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 GALCP54803 685 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 ATP11AP98196 1134 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 SFSWAPQ12872 951 aaKnown RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 AUHQ13825 339 aaKnown RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 CST6Q15828 149 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 HNRNPA1L2Q32P51 320 aaKnown RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 OTUD1Q5VV17 481 aaPredicted RBP16.45■□□□□ 0.22
VAPA-204ENST00000577901 TRNP1Q6NT89 227 aa16.45■□□□□ 0.22
VAPA-204ENST00000577901 DNAJC24Q6P3W2 148 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms