RNA–Protein interactions for RNA: ENST00000574848.5

LITAF-216, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-216ENST00000574848 SLC12A6Q9UHW9 1150 aa10.9□□□□□ -0.66
LITAF-216ENST00000574848 NOCTQ9UK39 431 aaKnown RBP10.9□□□□□ -0.66
LITAF-216ENST00000574848 SLC6A14Q9UN76 642 aa10.9□□□□□ -0.66
LITAF-216ENST00000574848 CNOT1A5YKK6 2376 aaKnown RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 GRID2IPA4D2P6 1211 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 C10orf142B7Z368 130 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 ERLIN1O75477 346 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 GRAP2O75791 330 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 KCNK5O95279 499 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 MYBL1P10243 752 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 ACADMP11310 421 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 PMLP29590 882 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 CXCR3P49682 368 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 PLK1P53350 603 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 HADHBP55084 474 aaKnown RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 RPS14P62263 151 aaKnown RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 RPS6KA1Q15418 735 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 HNRNPA1L2Q32P51 320 aaKnown RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 WDR45BQ5MNZ6 344 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 BRMS1LQ5PSV4 323 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 RABGAP1LQ5R372 815 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 SYCP2LQ5T4T6 812 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 MEI1Q5TIA1 1274 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 ZNF776Q68DI1 518 aaPredicted RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 CXorf57Q6NSI4 855 aaKnown RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 ZNF572Q7Z3I7 529 aaPredicted RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 XYLT1Q86Y38 959 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 CCDC117Q8IWD4 279 aaPredicted RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 CFAP52Q8N1V2 620 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 CARNMT1Q8N4J0 409 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 TPCN2Q8NHX9 752 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 PBKQ96KB5 322 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 PACSIN1Q9BY11 444 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 ISCUQ9H1K1 167 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 RSPH9Q9H1X1 276 aaPredicted RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 PDCL3Q9H2J4 239 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 SYNCQ9H7C4 482 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 PIGVQ9NUD9 493 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 ARHGEF38Q9NXL2 777 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.89□□□□□ -0.67
LITAF-216ENST00000574848 SUN2Q9UH99 717 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 STAP1Q9ULZ2 295 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 SCML1Q9UN30 329 aa10.89□□□□□ -0.67
LITAF-216ENST00000574848 V9GYY5 206 aaPredicted RBP10.89□□□□□ -0.67
LITAF-216ENST00000574848 METTL12A8MUP2 240 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 H0Y626 953 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 I6L893 689 aaPredicted RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 M0QYT0 321 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 ARHGAP33O14559 1287 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 GJB3O75712 270 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 CYP1A1P04798 512 aaPredicted RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 CFIP05156 583 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 MMEP08473 750 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 OXCT1P55809 520 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 GSCP56915 257 aaPredicted RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 ST8SIA6P61647 398 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 SHC2P98077 582 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 AUHQ13825 339 aaKnown RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 SLC25A52Q3SY17 297 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 TTC31Q49AM3 519 aaPredicted RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 ACBD5Q5T8D3 534 aaPredicted RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 FAM102AQ5T9C2 384 aaPredicted RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 FBXL22Q6P050 247 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 MMS22LQ6ZRQ5 1243 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 USP30Q70CQ3 517 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 PEX26Q7Z412 305 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 DAAM2Q86T65 1068 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 ZNF683Q8IZ20 524 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 DEFB119Q8N690 84 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 ZNF366Q8N895 744 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 MSANTD4Q8NCY6 345 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 C1orf216Q8TAB5 229 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 TSC1Q92574 1164 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 C18orf8Q96DM3 657 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 GPR174Q9BXC1 333 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 DNAAF2Q9NVR5 837 aaKnown RBP10.88□□□□□ -0.67
LITAF-216ENST00000574848 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.88□□□□□ -0.67
LITAF-216ENST00000574848 CTTNBP2NLQ9P2B4 639 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 UVRAGQ9P2Y5 699 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 LCMT1Q9UIC8 334 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 TMEM59LQ9UK28 342 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 AMFRQ9UKV5 643 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 ERVW-1Q9UQF0 538 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 HS3ST4Q9Y661 456 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 ADAMTS9Q9P2N4 1935 aa10.88□□□□□ -0.67
LITAF-216ENST00000574848 ASCC3Q8N3C0 2202 aaKnown RBP10.87□□□□□ -0.67
LITAF-216ENST00000574848 EDDM13A0A1B0GTR0 161 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 A0A1B0GTW7 788 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 TARSL2A2RTX5 802 aaKnown RBP10.87□□□□□ -0.67
LITAF-216ENST00000574848 MEI4A8MW99 385 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 TMCO5BA8MYB1 307 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 MIF4GDA9UHW6 222 aaKnown RBP10.87□□□□□ -0.67
LITAF-216ENST00000574848 SIN3BO75182 1162 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 PAGE1O75459 146 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 F9P00740 461 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 FTLP02792 175 aaPredicted RBP10.87□□□□□ -0.67
LITAF-216ENST00000574848 CEACAM1P13688 526 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 GNSP15586 552 aa10.87□□□□□ -0.67
LITAF-216ENST00000574848 TFE3P19532 575 aaPredicted RBP10.87□□□□□ -0.67
LITAF-216ENST00000574848 MMP8P22894 467 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms