RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 FAM72BQ86X60 149 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 ZNF677Q86XU0 584 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 NAXDQ8IW45 347 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 SH2D3CQ8N5H7 860 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 CCDC185Q8N715 623 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 PNPLA1Q8N8W4 532 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 CHST14Q8NCH0 376 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 MSANTD4Q8NCY6 345 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 OR14C36Q8NHC7 312 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 SLC32A1Q9H598 525 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 ZNF212Q9UDV6 495 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 SLC25A13Q9UJS0 675 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 BTBD3Q9Y2F9 522 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 USP24Q9UPU5 2620 aa11.62□□□□□ -0.55
RPAIN-214ENST00000574003 C2CD4BA6NLJ0 364 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 UPK3BL1B0FP48 263 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 C1QTNF9BB2RNN3 333 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 UPK3BL2E5RIL1 263 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 H0Y8X5 98 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 MBD3O95983 291 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 F9P00740 461 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 C1QTNF9P0C862 333 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 GOT1P17174 413 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 C5AR1P21730 350 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 CD27P26842 260 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 MAT2AP31153 395 aaKnown RBP11.61□□□□□ -0.55
RPAIN-214ENST00000574003 RFC1P35251 1148 aaPredicted RBP11.61□□□□□ -0.55
RPAIN-214ENST00000574003 SHC2P98077 582 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 SULT2A1Q06520 285 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 CNTN1Q12860 1018 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 ELAVL3Q14576 367 aaKnown RBP11.61□□□□□ -0.55
RPAIN-214ENST00000574003 SMYD5Q6GMV2 418 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 LRRC31Q6UY01 552 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 DRC7Q8IY82 874 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 CHCHD4Q8N4Q1 142 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 ATP11CQ8NB49 1132 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 ANKRD20A12PQ8NF67 263 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 OR2T34Q8NGX1 318 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 PIP4K2CQ8TBX8 421 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 SETD7Q8WTS6 366 aaKnown RBP11.61□□□□□ -0.55
RPAIN-214ENST00000574003 ERGIC2Q96RQ1 377 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 AGPAT1Q99943 283 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 SPON2Q9BUD6 331 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 SCNM1Q9BWG6 230 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 PCED1AQ9H1Q7 454 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 TNKS2Q9H2K2 1166 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 CAAP1Q9H8G2 361 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 TM7SF3Q9NS93 570 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 NDFIP2Q9NV92 336 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 TAS2R14Q9NYV8 317 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 ADAM22Q9P0K1 906 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 KLK13Q9UKR3 277 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 CA5BQ9Y2D0 317 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 ANKRD6Q9Y2G4 727 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 GOLGA4Q13439 2230 aaKnown RBP11.61□□□□□ -0.55
RPAIN-214ENST00000574003 AKAP13Q12802 2813 aa11.61□□□□□ -0.55
RPAIN-214ENST00000574003 IGLV3-10A0A075B6K4 115 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 A0A1W2PPC4 97 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 LRRC10BA6NIK2 292 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 C10orf142B7Z368 130 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 ADH1BP00325 375 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 OR1E1P30953 314 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 SDC4P31431 198 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 ACVRL1P37023 503 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 AFF3P51826 1226 aaKnown RBP11.6□□□□□ -0.55
RPAIN-214ENST00000574003 OXCT1P55809 520 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 HDAC4P56524 1084 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 TRIP6Q15654 476 aaKnown RBP11.6□□□□□ -0.55
RPAIN-214ENST00000574003 ST3GAL2Q16842 350 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 E4F1Q66K89 784 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-214ENST00000574003 RWDD4Q6NW29 188 aaKnown RBP11.6□□□□□ -0.55
RPAIN-214ENST00000574003 WDR59Q6PJI9 974 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 TRIM72Q6ZMU5 477 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 LEKR1Q6ZMV7 388 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 MON1BQ7L1V2 547 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 PYROXD2Q8N2H3 581 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 NETO2Q8NC67 525 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 FAM172AQ8WUF8 416 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 OR8D1Q8WZ84 308 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 KLK6Q92876 244 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 ARRDC3Q96B67 414 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 C1orf74Q96LT6 269 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 NAP1L5Q96NT1 182 aaPredicted RBP11.6□□□□□ -0.55
RPAIN-214ENST00000574003 HAPLN3Q96S86 360 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 SELENOOQ9BVL4 669 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 ZDHHC5Q9C0B5 715 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 ADAMTS1Q9UHI8 967 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 PPM1HQ9ULR3 514 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 FZD4Q9ULV1 537 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 SCML1Q9UN30 329 aa11.6□□□□□ -0.55
RPAIN-214ENST00000574003 FCF1Q9Y324 198 aaKnown RBP11.6□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3DA0A087WVF3 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3IA0A087WXS9 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3EA0A087X179 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3KA0A087X1G2 549 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TCRBV5S1A1TA0A578 114 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TBC1D3FA6NER0 549 aaPredicted RBP11.59□□□□□ -0.55
RPAIN-214ENST00000574003 LRRC72A6NJI9 287 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 GOLGA8CPA6NN73 597 aa11.59□□□□□ -0.55
RPAIN-214ENST00000574003 TMCO5BA8MYB1 307 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms