RNA–Protein interactions for RNA: ENST00000573577.5

RPAIN-213, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,282 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-213ENST00000573577 MAP7D1Q3KQU3 841 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 PPP6R3Q5H9R7 873 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-213ENST00000573577 PITRM1Q5JRX3 1037 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 KCNT1Q5JUK3 1230 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 DAB2IPQ5VWQ8 1189 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 RNF219Q5W0B1 726 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-213ENST00000573577 CYP4V2Q6ZWL3 525 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-213ENST00000573577 MAP7D3Q8IWC1 876 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 KIAA2013Q8IYS2 634 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 GPR161Q8N6U8 529 aaKnown RBP13.88□□□□□ -0.19
RPAIN-213ENST00000573577 HSPH1Q92598 858 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 MRGPRX1Q96LB2 322 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 FEM1AQ9BSK4 669 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 TSGA10Q9BZW7 698 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 SLC6A17Q9H1V8 727 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.88□□□□□ -0.19
RPAIN-213ENST00000573577 VPS28Q9UK41 221 aa13.88□□□□□ -0.19
RPAIN-213ENST00000573577 REXO2Q9Y3B8 237 aaKnown RBP13.88□□□□□ -0.19
RPAIN-213ENST00000573577 PTPRZ1P23471 2315 aaPredicted RBP13.88□□□□□ -0.19
RPAIN-213ENST00000573577 SPOPO43791 374 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 LRP3O75074 770 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 ZNF217O75362 1048 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 RARAP10276 462 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 HLA-EP13747 358 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 TCF4P15884 667 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 NNMTP40261 264 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 SPEM2Q0P670 501 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 CAMK2GQ13555 558 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-213ENST00000573577 KRT81Q14533 505 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 CA9Q16790 459 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 ZFYVE27Q5T4F4 411 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 PMS2CLQ68D20 193 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 KIAA1324Q6UXG2 1013 aaKnown RBP13.87□□□□□ -0.19
RPAIN-213ENST00000573577 RFX8Q6ZV50 586 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 POLNQ7Z5Q5 900 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 NLRP14Q86W24 1093 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 FRMD1Q8N878 549 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 RTL3Q8N8U3 475 aaKnown RBP13.87□□□□□ -0.19
RPAIN-213ENST00000573577 KDM1BQ8NB78 822 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 KCTD15Q96SI1 283 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-213ENST00000573577 DESI2Q9BSY9 194 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 C2orf49Q9BVC5 232 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-213ENST00000573577 MAGEB5Q9BZ81 275 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 MKRN2Q9H000 416 aaKnown RBP13.87□□□□□ -0.19
RPAIN-213ENST00000573577 PRDM16Q9HAZ2 1276 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 PARD6AQ9NPB6 346 aa13.87□□□□□ -0.19
RPAIN-213ENST00000573577 RCOR3Q9P2K3 495 aaPredicted RBP13.87□□□□□ -0.19
RPAIN-213ENST00000573577 RCCD1A6NED2 376 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 WASH4PA8MWX3 477 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 RAMP2O60895 175 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 SRPRAP08240 638 aaKnown RBP13.86□□□□□ -0.19
RPAIN-213ENST00000573577 TGM1P22735 817 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 MZF1P28698 734 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-213ENST00000573577 GJC1P36383 396 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 COPAP53621 1224 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 CDH6P55285 790 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 ECT2LQ008S8 904 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 GNA12Q03113 381 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 PDK2Q15119 407 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 ODF2Q5BJF6 829 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 ARTNQ5T4W7 220 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 LRRC38Q5VT99 294 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 C11orf63Q6NUN7 778 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 DAAM2Q86T65 1068 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 APCDD1Q8J025 514 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 ZNF366Q8N895 744 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 DCAF4L2Q8NA75 395 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 KCTD6Q8NC69 237 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 MYO19Q96H55 970 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 MRGPRX3Q96LB0 322 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 MAGEH1Q9H213 219 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 ARRDC1-AS1Q9H2J1 176 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 ZNF212Q9UDV6 495 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 DNAI1Q9UI46 699 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 MBD1Q9UIS9 605 aaPredicted RBP13.86□□□□□ -0.19
RPAIN-213ENST00000573577 SLC25A13Q9UJS0 675 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 CYP8B1Q9UNU6 501 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 TFR2Q9UP52 801 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 NEU3Q9UQ49 428 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 PCDHGA5Q9Y5G8 931 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 ADGRG1Q9Y653 693 aa13.86□□□□□ -0.19
RPAIN-213ENST00000573577 IGHV1OR15-9A0A0B4J2B8 117 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 BUB1O43683 1085 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 KRT86O43790 486 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 BUB1BO60566 1050 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 CCDC175P0C221 793 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 GOT1P17174 413 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 COMTP21964 271 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 CTSOP43234 321 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 YBEYP58557 167 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 CCZ1BP86790 482 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 CCZ1P86791 482 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 POLD3Q15054 466 aaPredicted RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 CSRP2Q16527 193 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 SLC36A4Q6YBV0 504 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 LPCAT2Q7L5N7 544 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 METTL3Q86U44 580 aaKnown RBP13.85□□□□□ -0.19
RPAIN-213ENST00000573577 TMPRSS6Q8IU80 811 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 RHOT1Q8IXI2 618 aa13.85□□□□□ -0.19
RPAIN-213ENST00000573577 LZTR1Q8N653 840 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms