RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 CSNK1EP49674 416 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 STK19P49842 368 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 IL9RQ01113 521 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 FNDC3BQ53EP0 1204 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 MBLAC2Q68D91 279 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 SDE2Q6IQ49 451 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 MSANTD2Q6P1R3 559 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 LCLAT1Q6UWP7 414 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 SLC36A4Q6YBV0 504 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 SLCO6A1Q86UG4 719 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 KCTD13Q8WZ19 329 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 MRRFQ96E11 262 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 NT5C1BQ96P26 610 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 GSDMAQ96QA5 445 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 ORAI3Q9BRQ5 295 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 CRACR2AQ9BSW2 395 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 INTS2Q9H0H0 1204 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 TMEM245Q9H330 911 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 EBF2Q9HAK2 575 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 PRSS16Q9NQE7 514 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 ITM2CQ9NQX7 267 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 KIAA1522Q9P206 1035 aaPredicted RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 HESX1Q9UBX0 185 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 STRIP2Q9ULQ0 834 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 TDRD6O60522 2096 aaKnown RBP9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 ADAMTS20P59510 1910 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 MYLKQ15746 1914 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 LOC400499M0QZD8 3231 aa9.58□□□□□ -0.88
NPLOC4-210ENST00000572824 BECN2A8MW95 431 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 CBX4O00257 560 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 WNT9AO14904 365 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 PAPSS1O43252 624 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 STX10O60499 249 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 ZNF217O75362 1048 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 SETSIPP0DME0 302 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 EPHA1P21709 976 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 GSTT1P30711 240 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 ATXN3P54252 364 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 RPS14P62263 151 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 LRRC63Q05C16 580 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 CAMK2GQ13555 558 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 MORC3Q14149 939 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 STARD3Q14849 445 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 SPDYCQ5MJ68 293 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 PRAMEF14Q5SWL7 426 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 PIK3R6Q5UE93 754 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 VN1R5Q7Z5H4 357 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 KIAA0907Q7Z7F0 614 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 TADA2BQ86TJ2 420 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 WFDC8Q8IUA0 241 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 PASD1Q8IV76 773 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 NAXDQ8IW45 347 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 TRIM59Q8IWR1 403 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 DHX40Q8IX18 779 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 APCDD1Q8J025 514 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 OR52K2Q8NGK3 314 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 RNF139Q8WU17 664 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 ZCCHC14Q8WYQ9 949 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 PRCCQ92733 491 aaPredicted RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 MRGPRX3Q96LB0 322 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 UBXN6Q9BZV1 441 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 DCLK3Q9C098 648 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 LHX5Q9H2C1 402 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 RMND1Q9NWS8 449 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 STOML2Q9UJZ1 356 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 ZNF510Q9Y2H8 683 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 HBS1LQ9Y450 684 aaKnown RBP9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 ATP6V1DQ9Y5K8 247 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 BAHCC1Q9P281 2608 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 DOCK4Q8N1I0 1966 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 ATRXP46100 2492 aa9.57□□□□□ -0.88
NPLOC4-210ENST00000572824 SYNJ2BP-COX16A0A087WUM0 186 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 SRRM3A6NNA2 597 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 TTC34A8MYJ7 566 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 E5RJQ4 531 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 RNF103O00237 685 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 ACSL4O60488 711 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 SYNCRIPO60506 623 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 CBFA2T3O75081 653 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 GRAP2O75791 330 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 SMC2O95347 1197 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 CYBBP04839 570 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 PAEPP09466 180 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 FTH1P19P0C7X4 201 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 TRIM21P19474 475 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 SLC9A1P19634 815 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 HOXD12P35452 270 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 CSKP41240 450 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 GPD2P43304 727 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 HARS2P49590 506 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 TBX4P57082 545 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 BYSLQ13895 437 aaKnown RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 KIF19Q2TAC6 998 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 PREPLQ4J6C6 727 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 MPPE1Q53F39 396 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 DCAF6Q58WW2 860 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 ADGRF1Q5T601 910 aa9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 OTUD1Q5VV17 481 aaPredicted RBP9.56□□□□□ -0.88
NPLOC4-210ENST00000572824 RAP1GAP2Q684P5 730 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms