RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 CNTN5O94779 1100 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MAP3K6O95382 1288 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 PENKP01210 267 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 RBP3P10745 1247 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 IL9P15248 144 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 PECAM1P16284 738 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 FNTAP49354 379 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DGKGP49619 791 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 IRAK1P51617 712 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 NDST2P52849 883 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 GEMIN4P57678 1058 aaKnown RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DR1Q01658 176 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 PFKPQ01813 784 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 GNA12Q03113 381 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 GBE1Q04446 702 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 KDSRQ06136 332 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 AP1B1Q10567 949 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 KLF1Q13351 362 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 SNX1Q13596 522 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC12A1Q13621 1099 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 RUNX3Q13761 415 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 BYSLQ13895 437 aaKnown RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DHCR24Q15392 516 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 PPP1R7Q15435 360 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ITPRIPL2Q3MIP1 535 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 C5orf22Q49AR2 442 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 FYB2Q5VWT5 728 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 GRAMD4Q6IC98 578 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DARS2Q6PI48 645 aaKnown RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 NPNTQ6UXI9 565 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ANKS1BQ7Z6G8 1248 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 NLRP14Q86W24 1093 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 TMEM25Q86YD3 366 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 LRRC49Q8IUZ0 686 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 KLHL7Q8IXQ5 586 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF683Q8IZ20 524 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 AHI1Q8N157 1196 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 UMODL1-AS1Q8N2C9 162 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 BBS5Q8N3I7 341 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC33Q8N5R6 958 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 NPWQ8N729 165 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DCAF4L2Q8NA75 395 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCDC26Q8TAB7 109 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 SNIP1Q8TAD8 396 aaKnown RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 C1orf54Q8WWF1 131 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DNASE1L2Q92874 299 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MAGOHBQ96A72 148 aaKnown RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ASIC4Q96FT7 647 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 HMCESQ96FZ2 354 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 FAM118BQ9BPY3 351 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 SPON2Q9BUD6 331 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 C2orf49Q9BVC5 232 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 CARD6Q9BX69 1037 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC2A11Q9BYW1 496 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MAGEB5Q9BZ81 275 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MAGEH1Q9H213 219 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ECT2Q9H8V3 914 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ABCB8Q9NUT2 735 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ETNK2Q9NVF9 386 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 DTLQ9NZJ0 730 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MARK1Q9P0L2 795 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 KIAA1522Q9P206 1035 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 PRKAG3Q9UGI9 489 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 FEZ2Q9UHY8 353 aaPredicted RBP6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC25A13Q9UJS0 675 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 GGA2Q9UJY4 613 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF148Q9UQR1 794 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MFHAS1Q9Y4C4 1052 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 TTLL3Q9Y4R7 772 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 PCDHB9Q9Y5E1 797 aa6.74□□□□□ -1.33
CTDNEP1-204ENST00000570484 MYH10P35580 1976 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 TCRBV7S2A1N4TA0A589 114 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZSCAN5CA6NGD5 496 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CBX4O00257 560 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 KCNN4O15554 427 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 LIASO43766 372 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLU7O95391 586 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 IFNB1P01574 187 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ASGR2P07307 311 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 PABPC1P11940 636 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 IL4RP24394 825 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CSKP41240 450 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 GARSP41250 739 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 TNNT3P45378 269 aaPredicted RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ST8SIA6P61647 398 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 TNK2Q07912 1038 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ADCY2Q08462 1091 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 GALNT2Q10471 571 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 XRCC4Q13426 336 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 DHX34Q14147 1143 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 DMC1Q14565 340 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 ZNF235Q14590 738 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 E2F5Q15329 346 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CCNG2Q16589 344 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 SLC45A4Q5BKX6 768 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 PITRM1Q5JRX3 1037 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 TEX35Q5T0J7 233 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 TMCO4Q5TGY1 634 aa6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 CXorf57Q6NSI4 855 aaKnown RBP6.73□□□□□ -1.33
CTDNEP1-204ENST00000570484 RETSATQ6NUM9 610 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms