RNA–Protein interactions for RNA: ENST00000569080.1

CDH3-209, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 291 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-209ENST00000569080 MIR1-1HGQ9H1L0 117 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 NEUROG2Q9H2A3 272 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 RTN4Q9NQC3 1192 aaKnown RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 TMEM51Q9NW97 253 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 FBXL12Q9NXK8 326 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 MPP6Q9NZW5 540 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 PPARGC1AQ9UBK2 798 aaKnown RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 VPS28Q9UK41 221 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 FNDC3AQ9Y2H6 1198 aaKnown RBP8.03□□□□□ -1.12
CDH3-209ENST00000569080 PAXBP1Q9Y5B6 917 aa8.03□□□□□ -1.12
CDH3-209ENST00000569080 LAMA5O15230 3695 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 A0A1B0GTH6 734 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 SPAARA0A1B0GVQ0 90 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 A0A1B0GVT2 93 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 A0A1W2PPC4 97 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 FAM72CH0Y354 149 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 K7ERQ8 282 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 ALOX15BO15296 676 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 SMAD6O43541 496 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 LATO43561 262 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 OPHN1O60890 802 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 RNASEH1O60930 286 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 CBFA2T3O75081 653 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 ZNF821O75541 412 aaPredicted RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 RNASEH2AO75792 299 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 FSBPO95073 299 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CD160O95971 181 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 TOP3BO95985 862 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 ADH1BP00325 375 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CTSLP07711 333 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 ZNF883P0CG24 379 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 C5AR1P21730 350 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 GLDCP23378 1020 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 SDC4P31431 198 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 RFC1P35251 1148 aaPredicted RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 NSFP46459 744 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 CSNK1EP49674 416 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 AFF3P51826 1226 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 ATXN3P54252 364 aaPredicted RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 PPP2CBP62714 309 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 PPP2CAP67775 309 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 ARF5P84085 180 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 C1QBPQ07021 282 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 SCAPQ12770 1279 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 SLC14A1Q13336 389 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CDO1Q16878 200 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 KIF19Q2TAC6 998 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 ACBD5Q5T8D3 534 aaPredicted RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 FAM72AQ5TYM5 149 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 FAM72DQ6L9T8 149 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CAVIN1Q6NZI2 390 aaKnown RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 C22orf39Q6P5X5 142 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 SND1Q7KZF4 910 aaKnown RBP eCLIP8.02□□□□□ -1.13
CDH3-209ENST00000569080 STRADAQ7RTN6 431 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 IRF2BP2Q7Z5L9 587 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 PHLDB2Q86SQ0 1253 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 FAM72BQ86X60 149 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 HDDC3Q8N4P3 179 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CCDC185Q8N715 623 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 OR7D4Q8NG98 312 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 OR2A12Q8NGT7 310 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 OR2T34Q8NGX1 318 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 BAHD1Q8TBE0 780 aaPredicted RBP8.02□□□□□ -1.13
CDH3-209ENST00000569080 SNX19Q92543 992 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 NTAN1Q96AB6 310 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 SLC6A18Q96N87 628 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CAMK1GQ96NX5 476 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 MAGEB5Q9BZ81 275 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 NDFIP2Q9NV92 336 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 TAS2R14Q9NYV8 317 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 ADAM22Q9P0K1 906 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 SLC25A13Q9UJS0 675 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 ANGPTL2Q9UKU9 493 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 PPM1HQ9ULR3 514 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 MYO6Q9UM54 1294 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CACNA1BQ00975 2339 aa8.02□□□□□ -1.13
CDH3-209ENST00000569080 CELSR3Q9NYQ7 3312 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 COL5A1P20908 1838 aaPredicted RBP8.01□□□□□ -1.13
CDH3-209ENST00000569080 DOCK9Q9BZ29 2069 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 CABIN1Q9Y6J0 2220 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 A0A1W2PR77 199 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 ILVBLA1L0T0 632 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 LRRC53A6NM62 1247 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 PLK4O00444 970 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 WNT9AO14904 365 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 MCF2LO15068 1137 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 SLC7A4O43246 635 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 CCP110O43303 1012 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 PLRG1O43660 514 aaKnown RBP8.01□□□□□ -1.13
CDH3-209ENST00000569080 SH3BP5O60239 455 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 LRIG2O94898 1065 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 IL1BP01584 269 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 WNT1P04628 370 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 CALB1P05937 261 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 GOT1P17174 413 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 RRM1P23921 792 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 ADRA1BP35368 520 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 NNMTP40261 264 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 CTSKP43235 329 aa8.01□□□□□ -1.13
CDH3-209ENST00000569080 ZNF165P49910 485 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms