RNA–Protein interactions for RNA: ENST00000568416.1

SPSB3-210, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 520 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-210ENST00000568416 HS3ST2Q9Y278 367 aa19.41■□□□□ 0.7
SPSB3-210ENST00000568416 USP24Q9UPU5 2620 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 PCNX2A6NKB5 2137 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 NYNRINQ9P2P1 1898 aaKnown RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 IGLV3-10A0A075B6K4 115 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3DA0A087WVF3 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3IA0A087WXS9 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3EA0A087X179 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3KA0A087X1G2 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3FA6NER0 549 aaPredicted RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3LB9A6J9 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 GOLGA8SH3BPF8 625 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 PLRG1O43660 514 aaKnown RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 RTN2O75298 545 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3HP0C7X1 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 SRCP12931 536 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 KRT83P78385 493 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3GQ6DHY5 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3CQ6IPX1 549 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 LRRC31Q6UY01 552 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 CCNI2Q6ZMN8 369 aaPredicted RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 ARCQ7LC44 396 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 SETD3Q86TU7 594 aaPredicted RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 TBC1D3Q8IZP1 549 aaPredicted RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 MSANTD4Q8NCY6 345 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 PIP4K2CQ8TBX8 421 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 CPA5Q8WXQ8 436 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 ELF4Q99607 663 aaPredicted RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 ARHGAP20Q9P2F6 1191 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 VPS51Q9UID3 782 aa19.4■□□□□ 0.7
SPSB3-210ENST00000568416 NOCTQ9UK39 431 aaKnown RBP19.4■□□□□ 0.7
SPSB3-210ENST00000568416 CACNA1BQ00975 2339 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 ZFHX4Q86UP3 3567 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 SRRM3A6NNA2 597 aaPredicted RBP19.39■□□□□ 0.69
SPSB3-210ENST00000568416 E9PAM4 449 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 C1QTNF3-AMACRE9PGA6 284 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 SNAP91O60641 907 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 MT-CO1P00395 513 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 KLK7P49862 253 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 IL9RQ01113 521 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 CNTN1Q12860 1018 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 KRT31Q15323 416 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 SHBQ15464 509 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 PRAMEF14Q5SWL7 426 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 AGBL4Q5VU57 503 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 NAA35Q5VZE5 725 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 ZNF677Q86XU0 584 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 DCAF4L2Q8NA75 395 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 SERAC1Q96JX3 654 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 CFAP57Q96MR6 1250 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 HAPLN3Q96S86 360 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 C2orf49Q9BVC5 232 aaPredicted RBP19.39■□□□□ 0.69
SPSB3-210ENST00000568416 VPS16Q9H269 839 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 MPP6Q9NZW5 540 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 PLXNA2O75051 1894 aa19.39■□□□□ 0.69
SPSB3-210ENST00000568416 TNFSF14O43557 240 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 GFPT2O94808 682 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 ENDOD1O94919 500 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 CYP1A1P04798 512 aaPredicted RBP19.38■□□□□ 0.69
SPSB3-210ENST00000568416 ZNF18P17022 549 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 NAPEPLDQ6IQ20 393 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 RBM43Q6ZSC3 357 aaKnown RBP19.38■□□□□ 0.69
SPSB3-210ENST00000568416 TMPRSS7Q7RTY8 843 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 PRPF39Q86UA1 669 aaKnown RBP19.38■□□□□ 0.69
SPSB3-210ENST00000568416 ATP11CQ8NB49 1132 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 SLC20A1Q8WUM9 679 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 ZNF212Q9UDV6 495 aa19.38■□□□□ 0.69
SPSB3-210ENST00000568416 A0A0D9SEW6 157 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 K7ERQ8 282 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 EPHB6O15197 1021 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 BNIP3LO60238 219 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 CTSLP07711 333 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 CHRNB2P17787 502 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 NUDT1P36639 197 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 JAM2P57087 298 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 NXPH1P58417 271 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 POLR2FP61218 127 aaKnown RBP19.37■□□□□ 0.69
SPSB3-210ENST00000568416 FMO1Q01740 532 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 CDR2Q01850 454 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 INAVAQ3KP66 663 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 POM121L1PQ3SYA9 428 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 SLC45A4Q5BKX6 768 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 C6orf118Q5T5N4 469 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 TFAP2DQ7Z6R9 452 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 TRIM69Q86WT6 500 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 FAM131BQ86XD5 332 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 EMC1Q8N766 993 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 OR2A12Q8NGT7 310 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 GDF3Q9NR23 364 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 METTL5Q9NRN9 209 aaKnown RBP19.37■□□□□ 0.69
SPSB3-210ENST00000568416 DMTF1Q9Y222 760 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 FRYQ5TBA9 3013 aa19.37■□□□□ 0.69
SPSB3-210ENST00000568416 GOLGA8CPA6NN73 597 aa19.36■□□□□ 0.69
SPSB3-210ENST00000568416 TLR4O00206 839 aa19.36■□□□□ 0.69
SPSB3-210ENST00000568416 TAF4O00268 1085 aa19.36■□□□□ 0.69
SPSB3-210ENST00000568416 SMAD6O43541 496 aaKnown RBP19.36■□□□□ 0.69
SPSB3-210ENST00000568416 SRGAP2O75044 1071 aa19.36■□□□□ 0.69
SPSB3-210ENST00000568416 MMP8P22894 467 aa19.36■□□□□ 0.69
SPSB3-210ENST00000568416 RRM1P23921 792 aa19.36■□□□□ 0.69
SPSB3-210ENST00000568416 OR1E1P30953 314 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms