RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	ZCCHC9	Q8N567	271 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	EMC1	Q8N766	993 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	DEFB124	Q8NES8	71 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	OR2I1P	Q8NGU4	316 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	OR2T34	Q8NGX1	318 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	OR8D1	Q8WZ84	308 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	RNF25	Q96BH1	459 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	BIRC7	Q96CA5	298 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	C11orf70	Q9BRQ4	267 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	C2orf49	Q9BVC5	232 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	MUC3B	Q9H195	1237 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	OSGEP	Q9NPF4	335 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	METTL5	Q9NRN9	209 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	SEPT11	Q9NVA2	429 aa	Known RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	MPP6	Q9NZW5	540 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	OR12D3	Q9UGF7	316 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	FZD4	Q9ULV1	537 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	MYO6	Q9UM54	1294 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	EPG5	Q9HCE0	2579 aa		7.1	□□□□□ -1.27
SF3B3-209	ENST00000567635	CEP295	Q9C0D2	2601 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3D	A0A087WVF3	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3I	A0A087WXS9	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3E	A0A087X179	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3K	A0A087X1G2	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635		A0A0D9SEW6	157 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635		A0A1B0GVT2	93 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ILVBL	A1L0T0	632 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ANKRD62	A6NC57	917 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3F	A6NER0	549 aa	Predicted RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	FAM47DP	A6NHR8	397 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	C2CD4B	A6NLJ0	364 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3L	B9A6J9	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	MCF2L	O15068	1137 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	GJB3	O75712	270 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	GJB6	O95452	261 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	MT-CO1	P00395	513 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	IL1B	P01584	269 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	PLEK	P08567	350 aa	Predicted RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3H	P0C7X1	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	VAV1	P15498	845 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TNFAIP3	P21580	790 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	PML	P29590	882 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	PTPN9	P43378	593 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	PSMD8	P48556	350 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	CCR5	P51681	352 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	GSC	P56915	257 aa	Predicted RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	SHC2	P98077	582 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	SLC20A2	Q08357	652 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	GRIK2	Q13002	908 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	HNRNPD	Q14103	355 aa	Known RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TEAD4	Q15561	434 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	CDO1	Q16878	200 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	C15orf59	Q2T9L4	293 aa	Predicted RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	HLA-B	Q31612	363 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	RAB6C	Q53S08	254 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ARTN	Q5T4W7	220 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	C6orf118	Q5T5N4	469 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3G	Q6DHY5	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3C	Q6IPX1	549 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ACAD10	Q6JQN1	1059 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	NCEH1	Q6PIU2	408 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	WDR59	Q6PJI9	974 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZNF783	Q6ZMS7	281 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	STRADA	Q7RTN6	431 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TFAP2D	Q7Z6R9	452 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TBC1D3	Q8IZP1	549 aa	Predicted RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	SH2D3C	Q8N5H7	860 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	AADAT	Q8N5Z0	425 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ATP11C	Q8NB49	1132 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	OR14C36	Q8NHC7	312 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	JOSD2	Q8TAC2	188 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	CENPI	Q92674	756 aa	Predicted RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	CNTNAP3B	Q96NU0	1288 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	PSMB7	Q99436	277 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	SPON2	Q9BUD6	331 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	SELENOO	Q9BVL4	669 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	CNTNAP3	Q9BZ76	1288 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ZYG11B	Q9C0D3	744 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	RAB6C	Q9H0N0	254 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	OSBPL2	Q9H1P3	480 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	RETREG1	Q9H6L5	497 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	GAREM1	Q9H706	876 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	TM9SF3	Q9HD45	589 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	SERGEF	Q9UGK8	458 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ANGPTL2	Q9UKU9	493 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	PPM1H	Q9ULR3	514 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	HS3ST2	Q9Y278	367 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	ANKRD36	A6QL64	1941 aa		7.09	□□□□□ -1.27
SF3B3-209	ENST00000567635	DNAH14	Q0VDD8	3507 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635	SHROOM3	Q8TF72	1996 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635	MYLK	Q15746	1914 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635	PLXNB3	Q9ULL4	1909 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635		A0A1W2PPC4	97 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635		K7ERQ8	282 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635	CBX4	O00257	560 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635	ALOX15B	O15296	676 aa		7.08	□□□□□ -1.28
SF3B3-209	ENST00000567635	SLC7A4	O43246	635 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms