RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 DCLK1O15075 740 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 RASA4O43374 803 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 ADAM23O75077 832 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 TNNT1P13805 278 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 KDELR1P24390 212 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 CTNNA1P35221 906 aaKnown RBP12.45□□□□□ -0.42
SF3B3-208ENST00000567250 CETN2P41208 172 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 ARSEP51690 589 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 SLC20A2Q08357 652 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 ZNF528Q3MIS6 628 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 ZC3H14Q6PJT7 736 aaKnown RBP12.45□□□□□ -0.42
SF3B3-208ENST00000567250 CPNE8Q86YQ8 564 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 KATNAL2Q8IYT4 538 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 UBL4BQ8N7F7 174 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 LRRC57Q8N9N7 239 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 OR7D4Q8NG98 312 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 TSC1Q92574 1164 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 FAF2Q96CS3 445 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 ZNF830Q96NB3 372 aaPredicted RBP12.45□□□□□ -0.42
SF3B3-208ENST00000567250 ACOX2Q99424 681 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 PSMB7Q99436 277 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 TMEM245Q9H330 911 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 GOLPH3Q9H4A6 298 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 ZDHHC4Q9NPG8 344 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 LZTFL1Q9NQ48 299 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 NDFIP2Q9NV92 336 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 BCCIPQ9P287 314 aaKnown RBP eCLIP12.45□□□□□ -0.42
SF3B3-208ENST00000567250 TRIM10Q9UDY6 481 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 HS3ST2Q9Y278 367 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 HYOU1Q9Y4L1 999 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 CAPN6Q9Y6Q1 641 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 FANCMQ8IYD8 2048 aa12.45□□□□□ -0.42
SF3B3-208ENST00000567250 EML5Q05BV3 1969 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 SHROOM3Q8TF72 1996 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 CCDC163A0A0D9SF12 145 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 EDDM13A0A1B0GTR0 161 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 TCRBV21S2A2A0A5A6 115 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 TARSL2A2RTX5 802 aaKnown RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 PALMO75781 387 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 ZFXP17010 805 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 PRKCHP24723 683 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 CTNNA2P26232 953 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 HOXA6P31267 233 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 WASP42768 502 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 SERPINH1P50454 418 aaKnown RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 PTPN5P54829 565 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 CSTF1Q05048 431 aaKnown RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 HNRNPA1L2Q32P51 320 aaKnown RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 TFDP3Q5H9I0 405 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 CCDC50Q8IVM0 306 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 SH2D3CQ8N5H7 860 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 ATP11CQ8NB49 1132 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 TRIM58Q8NG06 486 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 EXD1Q8NHP7 514 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 HMCESQ96FZ2 354 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 RPL10LQ96L21 214 aaKnown RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 MRGPRX3Q96LB0 322 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 HHIPQ96QV1 700 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 MAK16Q9BXY0 300 aaKnown RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 ACE2Q9BYF1 805 aaPredicted RBP12.44□□□□□ -0.42
SF3B3-208ENST00000567250 CEP44Q9C0F1 390 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 LRRC19Q9H756 370 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 SP110Q9HB58 689 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 HCN2Q9UL51 889 aa12.44□□□□□ -0.42
SF3B3-208ENST00000567250 GOLGA6L9A6NEM1 432 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 K7ESF4 209 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 DFFAO00273 331 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ALOX15BO15296 676 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 KDELR3O43731 214 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ATP9BO43861 1147 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 SNAP91O60641 907 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 RNASEH1O60930 286 aaKnown RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ZRANB2O95218 330 aaKnown RBP eCLIP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 CD48P09326 243 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 SRCP12931 536 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 AMPD1P23109 780 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 MSNP26038 577 aaKnown RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ACVRL1P37023 503 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 CTSOP43234 321 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 RECQLP46063 649 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 STK19P49842 368 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 RWDD2BP57060 319 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 COPS2P61201 443 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ARF5P84085 180 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 MMRN1Q13201 1228 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 SERINC3Q13530 473 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 CAMK2GQ13555 558 aaPredicted RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 TFDP2Q14188 446 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ELAVL3Q14576 367 aaKnown RBP12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ACCSLQ4AC99 568 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ATP13A4Q4VNC1 1196 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 NCBP2-AS2Q69YL0 99 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 ANO7Q6IWH7 933 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 C22orf39Q6P5X5 142 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 DSG4Q86SJ6 1040 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 NT5DC3Q86UY8 548 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 RASSF3Q86WH2 238 aa12.43□□□□□ -0.42
SF3B3-208ENST00000567250 LRRC49Q8IUZ0 686 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms