RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 AQP9O43315 295 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 ASLP04424 464 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 PLA2G4BP0C869 781 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 ITIH1P19827 911 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 HOXD9P28356 352 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 COPB1P53618 953 aaKnown RBP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 GTF2BQ00403 316 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 DRAP1Q14919 205 aaPredicted RBP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 DEFB133Q30KQ1 61 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 NUGGCQ68CJ6 796 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 ESRP1Q6NXG1 681 aaKnown RBP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 OR13H1Q8NG92 308 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 CXorf38Q8TB03 319 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 PRR7Q8TB68 274 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 FAM174AQ8TBP5 190 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 NOC3LQ8WTT2 800 aaKnown RBP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 CCDC34Q96HJ3 373 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 TNIP3Q96KP6 325 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 HAPLN3Q96S86 360 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 MRPL45Q9BRJ2 306 aaKnown RBP10.03□□□□□ -0.8
CAPN3-216ENST00000567071 B3GNT4Q9C0J1 378 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 CUEDC2Q9H467 287 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 DPEP3Q9H4B8 488 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 MAGEF1Q9HAY2 307 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 KRT82Q9NSB4 513 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 FOXJ2Q9P0K8 574 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 NAGPAQ9UK23 515 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 SCML2Q9UQR0 700 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 UNC13CQ8NB66 2214 aa10.03□□□□□ -0.8
CAPN3-216ENST00000567071 A0A1W2PQH9 124 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 SLC31A1O15431 190 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 TBCAO75347 108 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 LDLRP01130 860 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 KRT18P05783 430 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 PGFP49763 221 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 CUL4BQ13620 913 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 EIF2S3LQ2VIR3 472 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 ZNF542PQ5EBM4 170 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 ASB18Q6ZVZ8 466 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 SV2BQ7L1I2 683 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 DYMQ7RTS9 669 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 PTAR1Q7Z6K3 402 aaPredicted RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 GPBP1Q86WP2 473 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 KDM1BQ8NB78 822 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 TMEM145Q8NBT3 493 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 LMX1AQ8TE12 382 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 PDCD6IPQ8WUM4 868 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 PTPRN2Q92932 1015 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 TMA16Q96EY4 203 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 C5orf34Q96MH7 638 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 CGRRF1Q99675 332 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 REEP2Q9BRK0 252 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 INTS2Q9H0H0 1204 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 KBTBD4Q9NVX7 518 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 OSER1Q9NX31 292 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 IPO11Q9UI26 975 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 HOOK1Q9UJC3 728 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 PADI4Q9UM07 663 aa10.02□□□□□ -0.81
CAPN3-216ENST00000567071 NYNRINQ9P2P1 1898 aaKnown RBP10.02□□□□□ -0.81
CAPN3-216ENST00000567071 A6NNZ2 444 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 BIN1O00499 593 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PLRG1O43660 514 aaKnown RBP10.01□□□□□ -0.81
CAPN3-216ENST00000567071 CSF2P04141 144 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PRKAR1AP10644 381 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PRF1P14222 555 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 LIFP15018 202 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 TRIM21P19474 475 aaKnown RBP10.01□□□□□ -0.81
CAPN3-216ENST00000567071 SLC12A3P55017 1021 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 WNT7BP56706 349 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 MAP3K7CLP57077 242 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 EFEMP1Q12805 493 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 ARID5BQ14865 1188 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 DUOXA2Q1HG44 320 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 DEFB109BQ30KR1 87 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 C9orf64Q5T6V5 341 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PPP1R26Q5T8A7 1209 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-216ENST00000567071 RNF219Q5W0B1 726 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-216ENST00000567071 TCTN3Q6NUS6 607 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 RBM43Q6ZSC3 357 aaKnown RBP10.01□□□□□ -0.81
CAPN3-216ENST00000567071 KIAA0907Q7Z7F0 614 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PARGQ86W56 976 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 MCEMP1Q8IX19 187 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 CCDC13Q8IYE1 715 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 NKD1Q969G9 470 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 KIAA1143Q96AT1 154 aaPredicted RBP10.01□□□□□ -0.81
CAPN3-216ENST00000567071 SAAL1Q96ER3 474 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PPP1R13BQ96KQ4 1090 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 EFHD1Q9BUP0 239 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 CDH19Q9H159 772 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PDE11AQ9HCR9 933 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 INTS13Q9NVM9 706 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 EXOC7Q9UPT5 735 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 ENTPD4Q9Y227 616 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 CEP83Q9Y592 693 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 PCDHA5Q9Y5H7 936 aa10.01□□□□□ -0.81
CAPN3-216ENST00000567071 SHANK1Q9Y566 2161 aa10□□□□□ -0.81
CAPN3-216ENST00000567071 C9orf172C9J069 976 aa10□□□□□ -0.81
CAPN3-216ENST00000567071 AGRPO00253 132 aa10□□□□□ -0.81
CAPN3-216ENST00000567071 CLSTN1O94985 981 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms