RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 USP2O75604 605 aaPredicted RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 C2P06681 752 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 TFE3P19532 575 aaPredicted RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 MLH1P40692 756 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 HCAR3P49019 387 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 CRADDP78560 199 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 MPP3Q13368 585 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 SOWAHAQ2M3V2 549 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 NAPRTQ6XQN6 538 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 ZNF410Q86VK4 478 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 BEST2Q8NFU1 509 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 MAPK15Q8TD08 544 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 NT5C3BQ969T7 300 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 ZNF669Q96BR6 464 aaPredicted RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 OR52B2Q96RD2 323 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 FDXACB1Q9BRP7 624 aaPredicted RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 SLC2A11Q9BYW1 496 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 LRRC4Q9HBW1 653 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 EPS15L1Q9UBC2 864 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 CDYLQ9Y232 598 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 KAT6AQ92794 2004 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 AIM2O14862 343 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 IRF6O14896 467 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 GJB1P08034 283 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 SRGAP2BP0DMP2 458 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 ITPRIPL1Q6GPH6 555 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 PLD6Q8N2A8 252 aaKnown RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 HIPK4Q8NE63 616 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 ZC3H15Q8WU90 426 aaKnown RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 TRAPPC12Q8WVT3 735 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 DUS3LQ96G46 650 aaKnown RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 FCRL3Q96P31 734 aaPredicted RBP21.99■■□□□ 1.11
SPSB3-208ENST00000566339 GPR22Q99680 433 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 B3GNT5Q9BYG0 378 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 ZBTB26Q9HCK0 441 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 SNX9Q9Y5X1 595 aa21.99■■□□□ 1.11
SPSB3-208ENST00000566339 DDHD2O94830 711 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 NOS2P35228 1153 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 MAPRE2Q15555 327 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 ZBTB6Q15916 424 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 LSM12Q3MHD2 195 aaKnown RBP21.98■■□□□ 1.11
SPSB3-208ENST00000566339 KCTD11Q693B1 232 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 RBM44Q6ZP01 1051 aaKnown RBP21.98■■□□□ 1.11
SPSB3-208ENST00000566339 CMC1Q7Z7K0 106 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 CDRT15Q96T59 188 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 ACE2Q9BYF1 805 aaPredicted RBP21.98■■□□□ 1.11
SPSB3-208ENST00000566339 PRDM12Q9H4Q4 367 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 FAM49BQ9NUQ9 324 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 STAP1Q9ULZ2 295 aa21.98■■□□□ 1.11
SPSB3-208ENST00000566339 TRPC5OSA6NMA1 111 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 TRIM38O00635 465 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 XPO1O14980 1071 aaKnown RBP21.97■■□□□ 1.11
SPSB3-208ENST00000566339 DCLK1O15075 740 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 NPHS1O60500 1241 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 TSPAN1O60635 241 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 THOP1P52888 689 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 NSUN2Q08J23 767 aaKnown RBP eCLIP21.97■■□□□ 1.11
SPSB3-208ENST00000566339 VGLL4Q14135 290 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 PID1Q7Z2X4 250 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 KLHDC8BQ8IXV7 354 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 LRRN4Q8WUT4 740 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 NTAN1Q96AB6 310 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 AGAP3Q96P47 875 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 SHCBP1LQ9BZQ2 653 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 UBAP1Q9NZ09 502 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 CLIC5Q9NZA1 410 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 SUCOQ9UBS9 1254 aaKnown RBP21.97■■□□□ 1.11
SPSB3-208ENST00000566339 TLK1Q9UKI8 766 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 SQORQ9Y6N5 450 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 A0A1B0GVG6 124 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.97■■□□□ 1.11
SPSB3-208ENST00000566339 GRID2O43424 1007 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 CNMDO75829 334 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 FAM163BP0C2L3 166 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 SULT1E1P49888 294 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 TRAP1Q12931 704 aaKnown RBP21.97■■□□□ 1.11
SPSB3-208ENST00000566339 ART3Q13508 389 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 TTLL4Q14679 1199 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 UGP2Q16851 508 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 NADK2Q4G0N4 442 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 STYXQ8WUJ0 223 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 CPB2Q96IY4 423 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 MAELQ96JY0 434 aaKnown RBP21.97■■□□□ 1.11
SPSB3-208ENST00000566339 FAR2Q96K12 515 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 RHOJQ9H4E5 214 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 WDR41Q9HAD4 459 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 SETD4Q9NVD3 440 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 ZNF358Q9NW07 568 aa21.97■■□□□ 1.11
SPSB3-208ENST00000566339 KLHL8Q9P2G9 620 aaPredicted RBP21.97■■□□□ 1.11
SPSB3-208ENST00000566339 ACOT8O14734 319 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 PEX10O60683 326 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 CCDC166P0CW27 439 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 ETS2P15036 469 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 TFEBP19484 476 aa21.96■■□□□ 1.11
SPSB3-208ENST00000566339 KPNA2P52292 529 aaKnown RBP21.96■■□□□ 1.11
SPSB3-208ENST00000566339 ATXN1P54253 815 aaKnown RBP21.96■■□□□ 1.11
SPSB3-208ENST00000566339 TXNL4AP83876 142 aaKnown RBP21.96■■□□□ 1.11
SPSB3-208ENST00000566339 PPIDQ08752 370 aaKnown RBP21.96■■□□□ 1.11
SPSB3-208ENST00000566339 PCBP1Q15365 356 aaKnown RBP eCLIP21.96■■□□□ 1.11
SPSB3-208ENST00000566339 KLHDC10Q6PID8 442 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms