RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 TBC1D3LB9A6J9 549 aa19■□□□□ 0.63
CLN6-204ENST00000564752 EPHB6O15197 1021 aa19■□□□□ 0.63
CLN6-204ENST00000564752 ATP9BO43861 1147 aa19■□□□□ 0.63
CLN6-204ENST00000564752 TBC1D3HP0C7X1 549 aa19■□□□□ 0.63
CLN6-204ENST00000564752 ZNF18P17022 549 aa19■□□□□ 0.63
CLN6-204ENST00000564752 SOX5P35711 763 aa19■□□□□ 0.63
CLN6-204ENST00000564752 IRAK1P51617 712 aa19■□□□□ 0.63
CLN6-204ENST00000564752 METAP1P53582 386 aa19■□□□□ 0.63
CLN6-204ENST00000564752 ZNF177Q13360 481 aaPredicted RBP19■□□□□ 0.63
CLN6-204ENST00000564752 NCAPHQ15003 741 aa19■□□□□ 0.63
CLN6-204ENST00000564752 C5orf22Q49AR2 442 aa19■□□□□ 0.63
CLN6-204ENST00000564752 FAM102AQ5T9C2 384 aaPredicted RBP19■□□□□ 0.63
CLN6-204ENST00000564752 TBC1D3GQ6DHY5 549 aa19■□□□□ 0.63
CLN6-204ENST00000564752 TBC1D3CQ6IPX1 549 aa19■□□□□ 0.63
CLN6-204ENST00000564752 CAVIN1Q6NZI2 390 aaKnown RBP19■□□□□ 0.63
CLN6-204ENST00000564752 LRSAM1Q6UWE0 723 aa19■□□□□ 0.63
CLN6-204ENST00000564752 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19■□□□□ 0.63
CLN6-204ENST00000564752 C14orf80Q86SX3 495 aa19■□□□□ 0.63
CLN6-204ENST00000564752 ZNF677Q86XU0 584 aa19■□□□□ 0.63
CLN6-204ENST00000564752 TBC1D3Q8IZP1 549 aaPredicted RBP19■□□□□ 0.63
CLN6-204ENST00000564752 NEK11Q8NG66 645 aa19■□□□□ 0.63
CLN6-204ENST00000564752 OR52K2Q8NGK3 314 aa19■□□□□ 0.63
CLN6-204ENST00000564752 C18orf8Q96DM3 657 aa19■□□□□ 0.63
CLN6-204ENST00000564752 VANGL2Q9ULK5 521 aa19■□□□□ 0.63
CLN6-204ENST00000564752 STAP1Q9ULZ2 295 aa19■□□□□ 0.63
CLN6-204ENST00000564752 ADAMTS20P59510 1910 aa19■□□□□ 0.63
CLN6-204ENST00000564752 M0QYT0 321 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 LATO43561 262 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 PAGE1O75459 146 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 CLDN11O75508 207 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 SCNN1AP37088 669 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 GABRB2P47870 512 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 JAM2P57087 298 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 RNASE9P60153 205 aaKnown RBP18.99■□□□□ 0.63
CLN6-204ENST00000564752 NOMO3P69849 1222 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 UBXN1Q04323 297 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 SHBQ15464 509 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 INAVAQ3KP66 663 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 ANO6Q4KMQ2 910 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 NAA35Q5VZE5 725 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 GALNT15Q8N3T1 639 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 SLC20A1Q8WUM9 679 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 SERAC1Q96JX3 654 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 KDM4CQ9H3R0 1056 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 RRN3Q9NYV6 651 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLN6-204ENST00000564752 SLC25A13Q9UJS0 675 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 NOCTQ9UK39 431 aaKnown RBP18.99■□□□□ 0.63
CLN6-204ENST00000564752 SARDHQ9UL12 918 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 PPM1HQ9ULR3 514 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 TBC1D30Q9Y2I9 924 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 CELSR3Q9NYQ7 3312 aa18.99■□□□□ 0.63
CLN6-204ENST00000564752 PLXNB3Q9ULL4 1909 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 TLR4O00206 839 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 SLC7A4O43246 635 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 STAT1P42224 750 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 SULT1E1P49888 294 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 CDH4P55283 916 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 PPP2CBP62714 309 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 PPP2CAP67775 309 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 CDR2Q01850 454 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 ACAP1Q15027 740 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 DLG2Q15700 870 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 SMAD1Q15797 465 aaKnown RBP18.98■□□□□ 0.63
CLN6-204ENST00000564752 ACCSLQ4AC99 568 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 OTUD1Q5VV17 481 aaPredicted RBP18.98■□□□□ 0.63
CLN6-204ENST00000564752 FAM46CQ5VWP2 391 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 DSG4Q86SJ6 1040 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 XYLT1Q86Y38 959 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 GATAD2AQ86YP4 633 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 MDM1Q8TC05 714 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 SAP25Q8TEE9 199 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 CPA5Q8WXQ8 436 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 OR8D1Q8WZ84 308 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 NT5C3BQ969T7 300 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 NPY6RQ99463 290 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 HSD3B7Q9H2F3 369 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 GDF3Q9NR23 364 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 PIGVQ9NUD9 493 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 ARHGEF38Q9NXL2 777 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 ARHGAP20Q9P2F6 1191 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 FTSJ1Q9UET6 329 aa18.98■□□□□ 0.63
CLN6-204ENST00000564752 GOLGA8SH3BPF8 625 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 PLK4O00444 970 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 MCF2LO15068 1137 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 ALOX15BO15296 676 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 PLRG1O43660 514 aaKnown RBP18.97■□□□□ 0.63
CLN6-204ENST00000564752 RTN2O75298 545 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 ADCY5O95622 1261 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 GGCXP38435 758 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 CXCR3P49682 368 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 NXPH1P58417 271 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 C2CD6Q53TS8 623 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 SLC45A4Q5BKX6 768 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 MARCH9Q86YJ5 346 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 ERGIC2Q96RQ1 377 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 TKTL2Q9H0I9 626 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 SIK2Q9H0K1 926 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 WDCPQ9H6R7 721 aa18.97■□□□□ 0.63
CLN6-204ENST00000564752 ANLNQ9NQW6 1124 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms