RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 TP63Q9H3D4 680 aaPredicted RBP4.7□□□□□ -1.66
CHD9-212ENST00000564641 RAB21Q9UL25 225 aa4.7□□□□□ -1.66
CHD9-212ENST00000564641 MS4A18H0YCH9 400 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 HLA-DQA2P01906 255 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 AK2P54819 239 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 SELENOVP59797 346 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 LONRF1Q17RB8 773 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 TBRG1Q3YBR2 411 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 ZNF628Q5EBL2 1059 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 CCSAPQ6IQ19 270 aaPredicted RBP4.69□□□□□ -1.66
CHD9-212ENST00000564641 C8orf82Q6P1X6 216 aaPredicted RBP4.69□□□□□ -1.66
CHD9-212ENST00000564641 KDM1BQ8NB78 822 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 ENGASEQ8NFI3 743 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 IP6K1Q92551 441 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 ZNF333Q96JL9 665 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 CCDC136Q96JN2 1154 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 PRPF18Q99633 342 aaKnown RBP4.69□□□□□ -1.66
CHD9-212ENST00000564641 B3GNT4Q9C0J1 378 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 ACTR5Q9H9F9 607 aaPredicted RBP4.69□□□□□ -1.66
CHD9-212ENST00000564641 ZNF304Q9HCX3 659 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 LIN7CQ9NUP9 197 aaKnown RBP4.69□□□□□ -1.66
CHD9-212ENST00000564641 SLC39A10Q9ULF5 831 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 POGZQ7Z3K3 1410 aa4.69□□□□□ -1.66
CHD9-212ENST00000564641 ARAP3Q8WWN8 1544 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 TRBV5-7A0A0A0MS05 114 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 A0A1B0GVT2 93 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 PLEKHD1A6NEE1 506 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 NBPF7P0C2Y1 421 aaPredicted RBP4.68□□□□□ -1.66
CHD9-212ENST00000564641 MYZAPP0CAP1 466 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 HOXB9P17482 250 aaPredicted RBP4.68□□□□□ -1.66
CHD9-212ENST00000564641 CHRNB2P17787 502 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 TBX4P57082 545 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 RHAGQ02094 409 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 BTKQ06187 659 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 DUSP6Q16828 381 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 TRIM60Q495X7 471 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 PLK5Q496M5 336 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 FSCBQ5H9T9 825 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 CCDC25Q86WR0 208 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 DNASE2BQ8WZ79 361 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 RMI1Q9H9A7 625 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 MAGED2Q9UNF1 606 aaPredicted RBP4.68□□□□□ -1.66
CHD9-212ENST00000564641 PKP3Q9Y446 797 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 PCDHGB1Q9Y5G3 927 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 CFAP74Q9C0B2 1584 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 NEO1Q92859 1461 aa4.68□□□□□ -1.66
CHD9-212ENST00000564641 PPRC1Q5VV67 1664 aaKnown RBP4.67□□□□□ -1.66
CHD9-212ENST00000564641 ABCA8O94911 1581 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.67□□□□□ -1.66
CHD9-212ENST00000564641 DENND3A2RUS2 1198 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 TMEM247A6NEH6 219 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 EFCAB8A8MWE9 144 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 BTBD18B2RXH4 712 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 MYL3P08590 195 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 AKT1P31749 480 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 TNFSF8P32971 234 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 CDK7P50613 346 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 POLE2P56282 527 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 SEC61A1P61619 476 aaKnown RBP4.67□□□□□ -1.66
CHD9-212ENST00000564641 ABATP80404 500 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 SF3A3Q12874 501 aaKnown RBP eCLIP4.67□□□□□ -1.66
CHD9-212ENST00000564641 IZUMO4Q1ZYL8 232 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 CUZD1Q86UP6 607 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 TMEM200AQ86VY9 491 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 MUL1Q969V5 352 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 LMLNQ96KR4 655 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 IL36RNQ9UBH0 155 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 FBXO4Q9UKT5 387 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 PRXQ9BXM0 1461 aa4.67□□□□□ -1.66
CHD9-212ENST00000564641 ARID4BQ4LE39 1312 aaPredicted RBP4.67□□□□□ -1.66
CHD9-212ENST00000564641 IFITM10A6NMD0 228 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 SLC38A8A6NNN8 435 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 KIF28PB7ZC32 967 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 PIP5K1BO14986 540 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 PRC1O43663 620 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 KLRC2P26717 231 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 KLRK1P26718 216 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 PCP4P48539 62 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 CYP2J2P51589 502 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 POU3F1Q03052 451 aaPredicted RBP4.66□□□□□ -1.66
CHD9-212ENST00000564641 PICALMQ13492 652 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 TDRD12Q587J7 1177 aaKnown RBP4.66□□□□□ -1.66
CHD9-212ENST00000564641 ARL13AQ5H913 290 aaPredicted RBP4.66□□□□□ -1.66
CHD9-212ENST00000564641 PRAMEF19Q5SWL8 479 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 GSG1LQ6UXU4 331 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 NR2C2APQ86WQ0 139 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 SYTL1Q8IYJ3 562 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 IPO4Q8TEX9 1081 aaKnown RBP4.66□□□□□ -1.66
CHD9-212ENST00000564641 HMGB4Q8WW32 186 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 KIAA1191Q96A73 305 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 SORBS1Q9BX66 1292 aaKnown RBP4.66□□□□□ -1.66
CHD9-212ENST00000564641 KLHL31Q9H511 634 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 ARL15Q9NXU5 204 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 ICAM5Q9UMF0 924 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 CNTN6Q9UQ52 1028 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 PCDHGB2Q9Y5G2 931 aa4.66□□□□□ -1.66
CHD9-212ENST00000564641 HECW2Q9P2P5 1572 aa4.65□□□□□ -1.66
CHD9-212ENST00000564641 ABCA9Q8IUA7 1624 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms