RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 RNF34Q969K3 372 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CFAP36Q96G28 342 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SGSM3Q96HU1 749 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SMC6Q96SB8 1091 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PAFAH2Q99487 392 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CORO1BQ9BR76 489 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 WDR83Q9BRX9 315 aaKnown RBP7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 BRD8Q9H0E9 1235 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CRISPLD1Q9H336 500 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 POMKQ9H5K3 350 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ETNK1Q9HBU6 452 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 WDR6Q9NNW5 1121 aaKnown RBP7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SSU72Q9NP77 194 aaKnown RBP7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 EIF2B3Q9NR50 452 aaKnown RBP7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TMEM30AQ9NV96 361 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TMEM51Q9NW97 253 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HCFC1R1Q9NWW0 138 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SAMD15Q9P1V8 674 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ZC3H7BQ9UGR2 993 aaKnown RBP7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 RABGEF1Q9UJ41 708 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GGA2Q9UJY4 613 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 RRP15Q9Y3B9 282 aaKnown RBP7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MFHAS1Q9Y4C4 1052 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PTPRZ1P23471 2315 aaPredicted RBP7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 DENND4AQ7Z401 1863 aa7.62□□□□□ -1.19
MAP1LC3B-205ENST00000564638 DOCK8Q8NF50 2099 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MYO10Q9HD67 2058 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 NOTCH4Q99466 2003 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 IQANK1A0A1B0GTG1 560 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GOLGA6L7A0A1B0GV03 622 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TRIM66O15016 1216 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PRPF4O43172 522 aaKnown RBP eCLIP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 IRAK2O43187 625 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 C1RP00736 705 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 INHBAP08476 426 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 VIMP08670 466 aaKnown RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HAPLN1P10915 354 aaPredicted RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MYL4P12829 197 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ERCC2P18074 760 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MX2P20592 715 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GCAP28676 217 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HOXA9P31269 272 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HTR7P34969 479 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GRIK1P39086 918 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TUFMP49411 452 aaKnown RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SLC5A3P53794 718 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 EPHB3P54753 998 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 COG7P83436 770 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 IL9RQ01113 521 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 IFRD2Q12894 506 aaPredicted RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PLD1Q13393 1074 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 VEPH1Q14D04 833 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 EFTUD2Q15029 972 aaKnown RBP eCLIP7.61□□□□□ -1.193e-7■■■■□ 21.2
MAP1LC3B-205ENST00000564638 SMAD2Q15796 467 aaKnown RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 DDR2Q16832 855 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PABPC1LQ4VXU2 614 aaKnown RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 BRMS1LQ5PSV4 323 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ANKRD20A2Q5SQ80 823 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ANKRD20A1Q5TYW2 823 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ANKRD20A3Q5VUR7 823 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 BSPRYQ5W0U4 402 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ITPRIPL1Q6GPH6 555 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 C3orf62Q6ZUJ4 267 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SRLQ86TD4 932 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 HS6ST3Q8IZP7 471 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CYP4X1Q8N118 509 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ARHGAP18Q8N392 663 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ANKS4BQ8N8V4 417 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CCDC197Q8NCU1 140 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 CCNYQ8ND76 341 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 STKLD1Q8NE28 680 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PRSS33Q8NF86 280 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GPR152Q8TDT2 470 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 C2orf15Q8WU43 125 aaKnown RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ING5Q8WYH8 240 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SUSD6Q92537 303 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ZNF707Q96C28 371 aaPredicted RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MRRFQ96E11 262 aaKnown RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 FUBP3Q96I24 572 aaKnown RBP eCLIP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ZNF512Q96ME7 567 aaPredicted RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 NECTIN4Q96NY8 510 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PRMT1Q99873 361 aaKnown RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 DHRS4Q9BTZ2 278 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PHF7Q9BWX1 381 aaPredicted RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MAGEB5Q9BZ81 275 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TKTL2Q9H0I9 626 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SMOC2Q9H3U7 446 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 WDCPQ9H6R7 721 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TMPRSS4Q9NRS4 437 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 ABCC13Q9NSE7 274 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 SEPT10Q9P0V9 454 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 KLHL8Q9P2G9 620 aaPredicted RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MAFFQ9ULX9 164 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 MAGED2Q9UNF1 606 aaPredicted RBP7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TEX264Q9Y6I9 313 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 PKD1L2Q7Z442 2459 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GVINP1Q7Z2Y8 2422 aa7.61□□□□□ -1.19
MAP1LC3B-205ENST00000564638 GREB1Q4ZG55 1949 aa7.6□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TCRBV9S1A1TA0A576 114 aa7.6□□□□□ -1.19
MAP1LC3B-205ENST00000564638 TRDMT1O14717 391 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms