RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 TSC22D4Q9Y3Q8 395 aa2.78□□□□□ -1.97
CHD9-209ENST00000564255 KCNE2Q9Y6J6 123 aa2.78□□□□□ -1.97
CHD9-209ENST00000564255 BCAT2O15382 392 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 PDE8BO95263 885 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 TTLL1O95922 423 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ENO1P06733 434 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 CSH1P0DML2 217 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 CSH2P0DML3 217 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 NFKBIAP25963 317 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 GSTM2P28161 218 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ACSL1P33121 698 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 IDUAP35475 653 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 CYP4F2P78329 520 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 IFI35P80217 286 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 RHAGQ02094 409 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 SPDYAQ5MJ70 313 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 FNDC7Q5VTL7 733 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 CYP20A1Q6UW02 462 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 IKBIPQ70UQ0 350 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 CNTROBQ8N137 903 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 VPS52Q8N1B4 723 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 PAQR4Q8N4S7 273 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 WDTC1Q8N5D0 677 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 C11orf65Q8NCR3 313 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 OR52N4Q8NGI2 321 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 CELF1Q92879 486 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 DVL3Q92997 716 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 FEM1CQ96JP0 617 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 KLHL15Q96M94 604 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 CIPCQ9C0C6 399 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ASNSD1Q9NWL6 643 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 KIAA1456Q9P272 454 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 NFKBIL1Q9UBC1 381 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 SLC25A13Q9UJS0 675 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 A0A1W2PQF6 199 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 TMEM247A6NEH6 219 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 PTGES3LE9PB15 166 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 P4HA2O15460 535 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ADAP00813 363 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 DNTTP04053 509 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 EIF2S1P05198 315 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 SPARCP09486 303 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 HKR1P10072 659 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ZNF20P17024 532 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ZNF8P17098 575 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 SOX2P48431 317 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 OLR1P78380 273 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 MRPS35P82673 323 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 CYP4A11Q02928 519 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 TMEM115Q12893 351 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 AIMP2Q13155 320 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 PUM1Q14671 1186 aaKnown RBP eCLIP2.77□□□□□ -1.975e-7■■□□□ 11.8
CHD9-209ENST00000564255 RPE65Q16518 533 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 AP5B1Q2VPB7 878 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 FBXO43Q4G163 708 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 PLEKHS1Q5SXH7 462 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 RPUSD3Q6P087 351 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 ZNF474Q6S9Z5 364 aaPredicted RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 RNF144BQ7Z419 303 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ZNF804AQ7Z570 1209 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ANKRD23Q86SG2 305 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 PRPF39Q86UA1 669 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 TERB1Q8NA31 727 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 INTS12Q96CB8 462 aaKnown RBP2.77□□□□□ -1.97
CHD9-209ENST00000564255 C8orf49Q96NF6 230 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 MAP7D2Q96T17 732 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 SLF1Q9BQI6 1058 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 TXLNGYQ9BZA5 131 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 SCPEP1Q9HB40 452 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ICKQ9UPZ9 632 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 ADAM18Q9Y3Q7 739 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 CAPN7Q9Y6W3 813 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 SALL3Q9BXA9 1300 aa2.77□□□□□ -1.97
CHD9-209ENST00000564255 TCRBV5S1A1TA0A578 114 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 FRMD3A2A2Y4 597 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 PABPN1LA6NDY0 278 aaKnown RBP2.76□□□□□ -1.97
CHD9-209ENST00000564255 H7C1Q1 480 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 CLIC1O00299 241 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 DRD4P21917 467 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 GARSP41250 739 aaKnown RBP2.76□□□□□ -1.97
CHD9-209ENST00000564255 CTCFP49711 727 aaPredicted RBP2.76□□□□□ -1.97
CHD9-209ENST00000564255 VPS41P49754 854 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 CCT8P50990 548 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 ZBTB16Q05516 673 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 NEXNQ0ZGT2 675 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 PLK5Q496M5 336 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 SLC30A9Q6PML9 568 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 TMCO3Q6UWJ1 677 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 VSTM1Q6UX27 236 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 PRRT2Q7Z6L0 340 aaPredicted RBP2.76□□□□□ -1.97
CHD9-209ENST00000564255 TADA2BQ86TJ2 420 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 HSPH1Q92598 858 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 BBC3Q96PG8 261 aaPredicted RBP2.76□□□□□ -1.97
CHD9-209ENST00000564255 ZNF347Q96SE7 839 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 MACROD1Q9BQ69 325 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 CADM1Q9BY67 442 aaKnown RBP2.76□□□□□ -1.97
CHD9-209ENST00000564255 SPATS2LQ9NUQ6 558 aaKnown RBP2.76□□□□□ -1.97
CHD9-209ENST00000564255 SMPD4Q9NXE4 827 aa2.76□□□□□ -1.97
CHD9-209ENST00000564255 NCKIPSDQ9NZQ3 722 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms