RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 UBIAD1Q9Y5Z9 338 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 KANSL1LA0AUZ9 987 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 TRAFD1O14545 582 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-209ENST00000564068 MT-ND1P03886 318 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 ERBB2P04626 1255 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 SNRPB2P08579 225 aaKnown RBP12.82□□□□□ -0.36
COMMD4-209ENST00000564068 XRCC1P18887 633 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-209ENST00000564068 DEFA1P59665 94 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 DEFA3P59666 94 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 SLC6A3Q01959 620 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 ARL13AQ5H913 290 aaPredicted RBP12.82□□□□□ -0.36
COMMD4-209ENST00000564068 TMEM63BQ5T3F8 832 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 TMEM198Q66K66 360 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 PDSS2Q86YH6 399 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 BORCS5Q969J3 196 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.82□□□□□ -0.36
COMMD4-209ENST00000564068 COQ10BQ9H8M1 238 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 CYP3A43Q9HB55 503 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 UTP6Q9NYH9 597 aaKnown RBP12.82□□□□□ -0.36
COMMD4-209ENST00000564068 EFR3BQ9Y2G0 817 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 SPEF2Q9C093 1822 aa12.82□□□□□ -0.36
COMMD4-209ENST00000564068 LACTBL1A8MY62 500 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 STX16-NPEPL1H3BU86 382 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 PSMD3O43242 534 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 FCGR1AP12314 374 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 GOT1P17174 413 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CKMT2P17540 419 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 TTKP33981 857 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CD151P48509 253 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 RAD23AP54725 363 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CARTPTQ16568 116 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 BTBD8Q5XKL5 378 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 TRAF7Q6Q0C0 670 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CDHR3Q6ZTQ4 885 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 SLC41A1Q8IVJ1 513 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 DEFB106AQ8N104 65 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-209ENST00000564068 BPIFB6Q8NFQ5 453 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 FBXO27Q8NI29 283 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CAPSLQ8WWF8 208 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 BBS2Q9BXC9 721 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 SMARCAD1Q9H4L7 1026 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CD274Q9NZQ7 290 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 KCNU1A8MYU2 1149 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 ZBTB11O95625 1053 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-209ENST00000564068 PCNAP12004 261 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CCNA2P20248 432 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 THOP1P52888 689 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 POLD3Q15054 466 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-209ENST00000564068 ZPBP2Q6X784 338 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 IGDCC3Q8IVU1 814 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 PORCNQ9H237 461 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 DHX33Q9H6R0 707 aaKnown RBP12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CXorf21Q9HAI6 301 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 RRAGCQ9HB90 399 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 HMG20AQ9NP66 347 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 NDUFS3O75489 264 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 RBP1P09455 135 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 IL1R2P27930 398 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 GRIA1P42261 906 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CXCL9Q07325 125 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CDH17Q12864 832 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 CTBP1Q13363 440 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 FRG1Q14331 258 aaKnown RBP12.81□□□□□ -0.36
COMMD4-209ENST00000564068 ABRAXAS1Q6UWZ7 409 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 AMIGO3Q86WK7 504 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 AZIN2Q96A70 460 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 GATA5Q9BWX5 397 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-209ENST00000564068 PCDHAC1Q9H158 963 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 PCDH18Q9HCL0 1135 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 MID1IP1Q9NPA3 183 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 NDFIP2Q9NV92 336 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 TJP2Q9UDY2 1190 aa12.81□□□□□ -0.36
COMMD4-209ENST00000564068 COL1A1P02452 1464 aaPredicted RBP12.81□□□□□ -0.36
COMMD4-209ENST00000564068 A0A087WZ62 844 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 ANXA9O76027 345 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 VTNP04004 478 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 F7P08709 466 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-209ENST00000564068 CCNG1P51959 295 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 DLG2Q15700 870 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 LSM12Q3MHD2 195 aaKnown RBP12.8□□□□□ -0.36
COMMD4-209ENST00000564068 ATP6AP1LQ52LC2 224 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 SH3PXD2AQ5TCZ1 1133 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 RSBN1Q5VWQ0 802 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-209ENST00000564068 DNAJC14Q6Y2X3 702 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-209ENST00000564068 PTCD3Q96EY7 689 aaKnown RBP12.8□□□□□ -0.36
COMMD4-209ENST00000564068 TCF12Q99081 682 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 FDXACB1Q9BRP7 624 aaPredicted RBP12.8□□□□□ -0.36
COMMD4-209ENST00000564068 OSBPL6Q9BZF3 934 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 CDHR5Q9HBB8 845 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 EURLQ9NYK6 297 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 TSPAN3O60637 253 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 RHOBTB1O94844 696 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 JAK1P23458 1154 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 CRABP2P29373 138 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 IREB2P48200 963 aaKnown RBP12.8□□□□□ -0.36
COMMD4-209ENST00000564068 GSSP48637 474 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 HPCAP84074 193 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 ADGRE1Q14246 886 aa12.8□□□□□ -0.36
COMMD4-209ENST00000564068 TRIM25Q14258 630 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms