RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 STIM2Q9P246 746 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 ZFR2Q9UPR6 939 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 SRPRBQ9Y5M8 271 aaKnown RBP7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 CHD5Q8TDI0 1954 aa7.97□□□□□ -1.13
HERPUD1-206ENST00000563343 SHANK1Q9Y566 2161 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 A0A1W2PQU0 124 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 YJEFN3A6XGL0 299 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 E7ENQ6 273 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 RNF103O00237 685 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 TPP1O14773 563 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 LUC7L3O95232 432 aaKnown RBP7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 ZBED1O96006 694 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 HLA-DRAP01903 254 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 RPN1P04843 607 aaKnown RBP7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 HNRNPA2B1P22626 353 aaKnown RBP7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 STAT6P42226 847 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 TKTL1P51854 596 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 HNRNPKP61978 463 aaKnown RBP eCLIP7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 EIF3IQ13347 325 aaKnown RBP7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 DEFB133Q30KQ1 61 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 TPRG1LQ5T0D9 272 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 BSPRYQ5W0U4 402 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 OR6B2Q6IFH4 312 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 CCDC73Q6ZRK6 1079 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 NELFCDQ8IXH7 590 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 FBXO39Q8N4B4 442 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 CARNMT1Q8N4J0 409 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 HJURPQ8NCD3 748 aaPredicted RBP7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 WDR48Q8TAF3 677 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 CCDC3Q9BQI4 270 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 BACH2Q9BYV9 841 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 CYP3A43Q9HB55 503 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 KBTBD4Q9NVX7 518 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 DMAC2Q9NW81 257 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 DNAJC28Q9NX36 388 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 NCKIPSDQ9NZQ3 722 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 TUBD1Q9UJT1 453 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 ANAPC2Q9UJX6 822 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 PPM1HQ9ULR3 514 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 SRPK3Q9UPE1 567 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 PLAAQ9Y263 795 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 CLIC4Q9Y696 253 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 CSMD1Q96PZ7 3565 aa7.96□□□□□ -1.14
HERPUD1-206ENST00000563343 SPTY2D1-AS1A0A0U1RR47 76 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 POM121BA6NF01 834 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 A6NNZ2 444 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 MUSKO15146 869 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 SPINT1O43278 529 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 AQP9O43315 295 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 EXOC3O60645 756 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 CLSTN1O94985 981 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 CTSLP07711 333 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 RNF224P0DH78 156 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 CD58P19256 250 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 GJB2P29033 226 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 CCKBRP32239 447 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 ETV5P41161 510 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 POLE2P56282 527 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 KCNAB2Q13303 367 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 SPIDRQ14159 915 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 FGL2Q14314 439 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 NCAPHQ15003 741 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 NR0B2Q15466 257 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 TMEM259Q4ZIN3 620 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 ZNF394Q53GI3 561 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 DCAF6Q58WW2 860 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 MS4A13Q5J8X5 152 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 FAM26FQ5R3K3 315 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 MANEAQ5SRI9 462 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 ARHGAP17Q68EM7 881 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 NEK5Q6P3R8 708 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 CNNM4Q6P4Q7 775 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 KYAT3Q6YP21 454 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 Q6ZSR6 202 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 HORMAD1Q86X24 394 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 ZFAND4Q86XD8 727 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 JAMLQ86YT9 394 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 DCP2Q8IU60 420 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 CFAP52Q8N1V2 620 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 SLC4A11Q8NBS3 891 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 TMEM174Q8WUU8 243 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 OR8D1Q8WZ84 308 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 PANK2Q9BZ23 570 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 NUCKS1Q9H1E3 243 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 TNMDQ9H2S6 317 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 ABCC13Q9NSE7 274 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 FOXJ2Q9P0K8 574 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 CGNQ9P2M7 1197 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 TFIP11Q9UBB9 837 aaKnown RBP7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 RABGEF1Q9UJ41 708 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 PNMA8BQ9ULN7 279 aaPredicted RBP7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 ANKRD36A6QL64 1941 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 DOCK4Q8N1I0 1966 aa7.95□□□□□ -1.14
HERPUD1-206ENST00000563343 PRAMEF33A0A0G2JMD5 474 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 A0A1W2PQM1 296 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 C9orf172C9J069 976 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 D6RAR5 112 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 H3BQV1 296 aa7.94□□□□□ -1.14
HERPUD1-206ENST00000563343 XPO1O14980 1071 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms