RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 SPDYCQ5MJ68 293 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 MANEALQ5VSG8 457 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 SLFN11Q7Z7L1 901 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 SETD3Q86TU7 594 aaPredicted RBP17.01■□□□□ 0.31
CDT1-202ENST00000562747 CNGA4Q8IV77 575 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 SLC41A1Q8IVJ1 513 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 APCDD1Q8J025 514 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 CCDC185Q8N715 623 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 ALG14Q96F25 216 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 MYO19Q96H55 970 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 MRGPRX1Q96LB2 322 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 ZYG11BQ9C0D3 744 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 FBRSQ9HAH7 460 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 CAPN10Q9HC96 672 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 CD93Q9NPY3 652 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 SUN2Q9UH99 717 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 ERVW-1Q9UQF0 538 aa17.01■□□□□ 0.31
CDT1-202ENST00000562747 IGHV1OR15-9A0A0B4J2B8 117 aa17■□□□□ 0.31
CDT1-202ENST00000562747 ZNF217O75362 1048 aa17■□□□□ 0.31
CDT1-202ENST00000562747 HLA-EP13747 358 aa17■□□□□ 0.31
CDT1-202ENST00000562747 EIF4A3P38919 411 aaKnown RBP17■□□□□ 0.31
CDT1-202ENST00000562747 ATRXP46100 2492 aa17■□□□□ 0.31
CDT1-202ENST00000562747 TBX2Q13207 712 aaPredicted RBP17■□□□□ 0.31
CDT1-202ENST00000562747 COL9A2Q14055 689 aaPredicted RBP17■□□□□ 0.31
CDT1-202ENST00000562747 EFHC2Q5JST6 749 aa17■□□□□ 0.31
CDT1-202ENST00000562747 CCDC122Q5T0U0 273 aa17■□□□□ 0.31
CDT1-202ENST00000562747 C6orf118Q5T5N4 469 aa17■□□□□ 0.31
CDT1-202ENST00000562747 RNF219Q5W0B1 726 aaPredicted RBP17■□□□□ 0.31
CDT1-202ENST00000562747 SCYL2Q6P3W7 929 aa17■□□□□ 0.31
CDT1-202ENST00000562747 METTL3Q86U44 580 aaKnown RBP17■□□□□ 0.31
CDT1-202ENST00000562747 GAS2L3Q86XJ1 694 aa17■□□□□ 0.31
CDT1-202ENST00000562747 OR52K2Q8NGK3 314 aa17■□□□□ 0.31
CDT1-202ENST00000562747 MRGPRX3Q96LB0 322 aa17■□□□□ 0.31
CDT1-202ENST00000562747 NCAPGQ9BPX3 1015 aa17■□□□□ 0.31
CDT1-202ENST00000562747 FEM1AQ9BSK4 669 aa17■□□□□ 0.31
CDT1-202ENST00000562747 GTPBP2Q9BX10 602 aaKnown RBP17■□□□□ 0.31
CDT1-202ENST00000562747 SLC32A1Q9H598 525 aa17■□□□□ 0.31
CDT1-202ENST00000562747 MPP6Q9NZW5 540 aa17■□□□□ 0.31
CDT1-202ENST00000562747 MYO1AQ9UBC5 1043 aa17■□□□□ 0.31
CDT1-202ENST00000562747 NENFQ9UMX5 172 aa17■□□□□ 0.31
CDT1-202ENST00000562747 NEUROG3Q9Y4Z2 214 aa17■□□□□ 0.31
CDT1-202ENST00000562747 PCNX2A6NKB5 2137 aa17■□□□□ 0.31
CDT1-202ENST00000562747 DOCK4Q8N1I0 1966 aa17■□□□□ 0.31
CDT1-202ENST00000562747 UPK3BL1B0FP48 263 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 AKR1B15C9JRZ8 316 aaPredicted RBP16.99■□□□□ 0.31
CDT1-202ENST00000562747 UPK3BL2E5RIL1 263 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 RNF8O76064 485 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 RHOCP08134 193 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 SERPINF2P08697 491 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 C7P10643 843 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 OR1E1P30953 314 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 L1CAMP32004 1257 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 HOXD12P35452 270 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 NNMTP40261 264 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 VASPP50552 380 aaPredicted RBP16.99■□□□□ 0.31
CDT1-202ENST00000562747 COPAP53621 1224 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 ADKP55263 362 aaKnown RBP16.99■□□□□ 0.31
CDT1-202ENST00000562747 ACAP1Q15027 740 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 SLC18A3Q16572 532 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 DUOXA1Q1HG43 343 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 ASTE1Q2TB18 679 aaPredicted RBP16.99■□□□□ 0.31
CDT1-202ENST00000562747 ZNF783Q6ZMS7 281 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 TFAP2DQ7Z6R9 452 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 TMPRSS6Q8IU80 811 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 OR2T3Q8NH03 318 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 MKRN2Q9H000 416 aaKnown RBP16.99■□□□□ 0.31
CDT1-202ENST00000562747 THAP2Q9H0W7 228 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 MUC3BQ9H195 1237 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 SLC6A17Q9H1V8 727 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 DEF6Q9H4E7 631 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 PRDM16Q9HAZ2 1276 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 ZNF212Q9UDV6 495 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 VPS28Q9UK41 221 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 FZD10Q9ULW2 581 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 SLC6A14Q9UN76 642 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 CYP8B1Q9UNU6 501 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 OR51B4Q9Y5P0 310 aa16.99■□□□□ 0.31
CDT1-202ENST00000562747 ILVBLA1L0T0 632 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 FAM72CH0Y354 149 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 LRIG2O94898 1065 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 CYP1A2P05177 515 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 RHOQP17081 205 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 DPP6P42658 865 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 CTSOP43234 321 aaPredicted RBP16.98■□□□□ 0.31
CDT1-202ENST00000562747 KRT83P78385 493 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 GFPT1Q06210 699 aaPredicted RBP16.98■□□□□ 0.31
CDT1-202ENST00000562747 ZNF33AQ06730 810 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 HNRNPA1L2Q32P51 320 aaKnown RBP16.98■□□□□ 0.31
CDT1-202ENST00000562747 FAM72AQ5TYM5 149 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 FAM72DQ6L9T8 149 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 FAM72BQ86X60 149 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 MINDY1Q8N5J2 469 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 ZNF366Q8N895 744 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 PRCCQ92733 491 aaPredicted RBP16.98■□□□□ 0.31
CDT1-202ENST00000562747 TBC1D31Q96DN5 1066 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 MRFAP1L1Q96HT8 127 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 TRIM7Q9C029 511 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 PRSS16Q9NQE7 514 aa16.98■□□□□ 0.31
CDT1-202ENST00000562747 SLC25A13Q9UJS0 675 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms