RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 MUC3BQ9H195 1237 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 NOL6Q9H6R4 1146 aaKnown RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 THG1LQ9NWX6 298 aaKnown RBP10.53□□□□□ -0.72
USP3-219ENST00000561326 ZNF212Q9UDV6 495 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 FAM153AQ9UHL3 310 aa10.53□□□□□ -0.72
USP3-219ENST00000561326 ERI2A8K979 691 aaKnown RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 AP3B1O00203 1094 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 EIF3HO15372 352 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP3-219ENST00000561326 KDELR3O43731 214 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 PPFIA2O75334 1257 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 ANXA9O76027 345 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 LUC7L3O95232 432 aaKnown RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 GLP2RO95838 553 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 APRTP07741 180 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 TPSB2P20231 275 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 ECHS1P30084 290 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 HSPA9P38646 679 aaKnown RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 MTHFRP42898 656 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 MAGEA6P43360 314 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 ARL4CP56559 192 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 GPS2Q13227 327 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 SLC12A1Q13621 1099 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 TPSAB1Q15661 275 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 HIF1AQ16665 826 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 ALS2CLQ60I27 953 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 SYCE2Q6PIF2 218 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 RHBDF2Q6PJF5 856 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 EP400NLQ6ZTU2 488 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 CENPUQ71F23 418 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 TRMT10CQ7L0Y3 403 aaKnown RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 TAB3Q8N5C8 712 aaPredicted RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 NAT8LQ8N9F0 302 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 MCUQ8NE86 351 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 DEPDC1BQ8WUY9 529 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 CPT1BQ92523 772 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 PRCCQ92733 491 aaPredicted RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 FGF13Q92913 245 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 SMARCD2Q92925 531 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 MYEOVQ96EZ4 313 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 PRICKLE1Q96MT3 831 aaPredicted RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 GDAP1L1Q96MZ0 367 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 AGAP3Q96P47 875 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 RBM15Q96T37 977 aaKnown RBP eCLIP10.52□□□□□ -0.73
USP3-219ENST00000561326 GAS2L1Q99501 681 aaPredicted RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 IL12RB2Q99665 862 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 APOL5Q9BWW9 433 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 PHACTR1Q9C0D0 580 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 NEUROG2Q9H2A3 272 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 VIPAS39Q9H9C1 493 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 RBM22Q9NW64 420 aaKnown RBP eCLIP10.52□□□□□ -0.736e-10■■■■□ 22.8
USP3-219ENST00000561326 OBP2AQ9NY56 170 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 KIAA1522Q9P206 1035 aaPredicted RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 IGSF9Q9P2J2 1179 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 RSPH14Q9UHP6 348 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 CCL26Q9Y258 94 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 ATP8A1Q9Y2Q0 1164 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 AAR2Q9Y312 384 aaKnown RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 FARP1Q9Y4F1 1045 aaPredicted RBP10.52□□□□□ -0.73
USP3-219ENST00000561326 TRIOBPQ9H2D6 2365 aa10.52□□□□□ -0.73
USP3-219ENST00000561326 RANBP2P49792 3224 aaKnown RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 GFRA2O00451 464 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 NRG2O14511 850 aaPredicted RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 SCAMP3O14828 347 aaKnown RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 LINC01565O15544 149 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 ZBTB24O43167 697 aaPredicted RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 PRAMEF11O60813 436 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 PRAMEF12O95522 483 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 METTL18O95568 372 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 IGFBP4P22692 258 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 ACVRL1P37023 503 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 MMP13P45452 471 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 IFNAR2P48551 515 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 PMS2P54278 862 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 NRLP54845 237 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 GEMIN4P57678 1058 aaKnown RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 USP4Q13107 963 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 SEMA5AQ13591 1074 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 KCNJ11Q14654 390 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 RFTN1Q14699 578 aaPredicted RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 CASP8Q14790 479 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 ZNF77Q15935 545 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 KCTD19Q17RG1 926 aaPredicted RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 ARHGAP36Q6ZRI8 547 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 TPGS1Q6ZTW0 290 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 TMC3Q7Z5M5 1100 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 MFN1Q8IWA4 741 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 NPAS3Q8IXF0 933 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 ADGRG2Q8IZP9 1017 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 FIBINQ8TAL6 211 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 UBLCP1Q8WVY7 318 aaPredicted RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 MAML1Q92585 1016 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 IRF7Q92985 503 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 PABPC5Q96DU9 382 aaKnown RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 PKNOX2Q96KN3 472 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 TTC25Q96NG3 672 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 FEM1AQ9BSK4 669 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 C2orf49Q9BVC5 232 aaPredicted RBP10.51□□□□□ -0.73
USP3-219ENST00000561326 BBS2Q9BXC9 721 aa10.51□□□□□ -0.73
USP3-219ENST00000561326 FUT8Q9BYC5 575 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms