RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 USP30Q70CQ3 517 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 ARMCX6Q7L4S7 300 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 SLC47A2Q86VL8 602 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 TMPRSS6Q8IU80 811 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 ZDHHC17Q8IUH5 632 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 MFN1Q8IWA4 741 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 BAHD1Q8TBE0 780 aaPredicted RBP7.1□□□□□ -1.27
SPG11-224ENST00000561268 PIGKQ92643 395 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 FAM149B1Q96BN6 582 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 ALG14Q96F25 216 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 SIPA1Q96FS4 1042 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 TOE1Q96GM8 510 aaKnown RBP7.1□□□□□ -1.27
SPG11-224ENST00000561268 CALR3Q96L12 384 aaKnown RBP7.1□□□□□ -1.27
SPG11-224ENST00000561268 NPY6RQ99463 290 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 DDX50Q9BQ39 737 aaKnown RBP7.1□□□□□ -1.27
SPG11-224ENST00000561268 NUSAP1Q9BXS6 441 aaKnown RBP7.1□□□□□ -1.27
SPG11-224ENST00000561268 CIPCQ9C0C6 399 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 MIS12Q9H081 205 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 FAM107BQ9H098 131 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 RSPH9Q9H1X1 276 aaPredicted RBP7.1□□□□□ -1.27
SPG11-224ENST00000561268 PRSS16Q9NQE7 514 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 ST7Q9NRC1 585 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 TMEM51Q9NW97 253 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.1□□□□□ -1.27
SPG11-224ENST00000561268 RRN3Q9NYV6 651 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 ZNF212Q9UDV6 495 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 ADAMTS1Q9UHI8 967 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 NOCTQ9UK39 431 aaKnown RBP7.1□□□□□ -1.27
SPG11-224ENST00000561268 DNAJC12Q9UKB3 198 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 SLC6A14Q9UN76 642 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 JRKLQ9Y4A0 524 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 SAR1BQ9Y6B6 198 aa7.1□□□□□ -1.27
SPG11-224ENST00000561268 ACACAQ13085 2346 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 IGLV3-10A0A075B6K4 115 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 TYW5A2RUC4 315 aaKnown RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 METTL12A8MUP2 240 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 BTNL10A8MVZ5 291 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 FOXN3O00409 490 aaPredicted RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 TSPAN3O60637 253 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 TBL1XO60907 577 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 DKK1O94907 266 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ATP5BP06576 529 aaKnown RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 EPHX1P07099 455 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 SLC2A3P11169 496 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 HLA-EP13747 358 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 CYP11B1P15538 503 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 TCP1P17987 556 aaKnown RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 TACR2P21452 398 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 NOS2P35228 1153 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ACTN2P35609 894 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 CSKP41240 450 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 MATKP42679 507 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 IRAK1P51617 712 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 VAV2P52735 878 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 BPIFB4P59827 614 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 RPS14P62263 151 aaKnown RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 BNC1Q01954 994 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 PTK2Q05397 1052 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 GRIK2Q13002 908 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 SLC14A1Q13336 389 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 CDH18Q13634 790 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 DRAP1Q14919 205 aaPredicted RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 ARHGAP44Q17R89 818 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ZC3H12AQ5D1E8 599 aaKnown RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 FSCBQ5H9T9 825 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 PITRM1Q5JRX3 1037 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 EFHC1Q5JVL4 640 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 BRMS1LQ5PSV4 323 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 N4BP2L1Q5TBK1 243 aaPredicted RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 ZNF776Q68DI1 518 aaPredicted RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 TRNP1Q6NT89 227 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 PSAPL1Q6NUJ1 521 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 KIAA1324Q6UXG2 1013 aaKnown RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 CHSY1Q86X52 802 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 DEFB106AQ8N104 65 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 PGBD3Q8N328 593 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 SLC35F6Q8N357 371 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 MMGT1Q8N4V1 131 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ATP6V0D2Q8N8Y2 350 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 OR52K2Q8NGK3 314 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ADAM32Q8TC27 787 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 FRS2Q8WU20 508 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 CYB5D2Q8WUJ1 264 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 PRCCQ92733 491 aaPredicted RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 NOX5Q96PH1 765 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ZDHHC5Q9C0B5 715 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ARHGEF38Q9NXL2 777 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.09□□□□□ -1.27
SPG11-224ENST00000561268 ADAM21Q9UKJ8 722 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 FZD4Q9ULV1 537 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 SCML1Q9UN30 329 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 NEU3Q9UQ49 428 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 SIK3Q9Y2K2 1263 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.09□□□□□ -1.27
SPG11-224ENST00000561268 OR51B4Q9Y5P0 310 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 KNTC1P50748 2209 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 SCN8AQ9UQD0 1980 aa7.09□□□□□ -1.27
SPG11-224ENST00000561268 FAM208BQ5VWN6 2430 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 FRYQ5TBA9 3013 aa7.08□□□□□ -1.28
SPG11-224ENST00000561268 ADAMTS20P59510 1910 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms