RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 C1orf74Q96LT6 269 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 ELF4Q99607 663 aaPredicted RBP16.65■□□□□ 0.26
SNX1-213ENST00000561026 MUC3BQ9H195 1237 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 RALYQ9UKM9 306 aaKnown RBP16.65■□□□□ 0.26
SNX1-213ENST00000561026 PAXBP1Q9Y5B6 917 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 ANKRD11Q6UB99 2663 aaPredicted RBP16.65■□□□□ 0.26
SNX1-213ENST00000561026 TMEM131Q92545 1883 aa16.65■□□□□ 0.26
SNX1-213ENST00000561026 DRGXA6NNA5 263 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 TAF4O00268 1085 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 PLK4O00444 970 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 ALOX15BO15296 676 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 RTN2O75298 545 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 LSM8O95777 96 aaKnown RBP16.64■□□□□ 0.26
SNX1-213ENST00000561026 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.26
SNX1-213ENST00000561026 PPP2CBP62714 309 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 PPP2CAP67775 309 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 DEUP1Q05D60 604 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 FAM102AQ5T9C2 384 aaPredicted RBP16.64■□□□□ 0.26
SNX1-213ENST00000561026 TAF3Q5VWG9 929 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 Q6ZVU0 165 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 SETD3Q86TU7 594 aaPredicted RBP16.64■□□□□ 0.26
SNX1-213ENST00000561026 TBCBQ99426 244 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 STK33Q9BYT3 514 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 ARHGAP20Q9P2F6 1191 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 HS3ST2Q9Y278 367 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 SNX10Q9Y5X0 201 aa16.64■□□□□ 0.26
SNX1-213ENST00000561026 ZFYVE26Q68DK2 2539 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 GOLGA8CPA6NN73 597 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 C1QTNF3-AMACRE9PGA6 284 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 TLR4O00206 839 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 PLRG1O43660 514 aaKnown RBP16.64■□□□□ 0.25
SNX1-213ENST00000561026 MT-CO1P00395 513 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 ZNF18P17022 549 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 FLT3P36888 993 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 KRT83P78385 493 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 CNTN1Q12860 1018 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 SHBQ15464 509 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 INAVAQ3KP66 663 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 C2CD6Q53TS8 623 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 SLC45A4Q5BKX6 768 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 ACBD5Q5T8D3 534 aaPredicted RBP16.64■□□□□ 0.25
SNX1-213ENST00000561026 AGBL4Q5VU57 503 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 LRRC31Q6UY01 552 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 NOP9Q86U38 636 aaKnown RBP16.64■□□□□ 0.25
SNX1-213ENST00000561026 PRPF39Q86UA1 669 aaKnown RBP16.64■□□□□ 0.25
SNX1-213ENST00000561026 PROSER1Q86XN7 944 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 PIP4K2CQ8TBX8 421 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 PSMB7Q99436 277 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 C2orf49Q9BVC5 232 aaPredicted RBP16.64■□□□□ 0.25
SNX1-213ENST00000561026 GDF3Q9NR23 364 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 TMEM59LQ9UK28 342 aa16.64■□□□□ 0.25
SNX1-213ENST00000561026 PLXNA2O75051 1894 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 LAMA5O15230 3695 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 IGLV3-10A0A075B6K4 115 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 FAM170AA1A519 330 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 F8VZ95 297 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 BNIP3LO60238 219 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 SNAP91O60641 907 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 RHOCP08134 193 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 SRCP12931 536 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 NUDT1P36639 197 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 POM121L1PQ3SYA9 428 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 NAPEPLDQ6IQ20 393 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 TRNP1Q6NT89 227 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 BNIPLQ7Z465 357 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 GATAD2AQ86YP4 633 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 MFSD2AQ8NA29 543 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 ATP11CQ8NB49 1132 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 EPS8L1Q8TE68 723 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 SAP25Q8TEE9 199 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 CPA5Q8WXQ8 436 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 TMPRSS4Q9NRS4 437 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 MPP6Q9NZW5 540 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 VPS51Q9UID3 782 aa16.63■□□□□ 0.25
SNX1-213ENST00000561026 CELSR3Q9NYQ7 3312 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 PLXNB3Q9ULL4 1909 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 A0A0D9SEW6 157 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 GOLGA8SH3BPF8 625 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 K7ERQ8 282 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 YKT6O15498 198 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 MMEP08473 750 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 OR1E1P30953 314 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 MAT2AP31153 395 aaKnown RBP16.62■□□□□ 0.25
SNX1-213ENST00000561026 ARRB1P49407 418 aaPredicted RBP16.62■□□□□ 0.25
SNX1-213ENST00000561026 NXPH1P58417 271 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 NOMO3P69849 1222 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 ARTNQ5T4W7 220 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 C6orf118Q5T5N4 469 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 NAA35Q5VZE5 725 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 ARCQ7LC44 396 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 TFAP2DQ7Z6R9 452 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 TRIM69Q86WT6 500 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 GALNT15Q8N3T1 639 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 DCAF4L2Q8NA75 395 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 MSANTD4Q8NCY6 345 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 OR2A12Q8NGT7 310 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 ENOX1Q8TC92 643 aaKnown RBP16.62■□□□□ 0.25
SNX1-213ENST00000561026 CFAP57Q96MR6 1250 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 HAPLN3Q96S86 360 aa16.62■□□□□ 0.25
SNX1-213ENST00000561026 ERVMER34-1Q9H9K5 563 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms