RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 MAPK8IP1Q9UQF2 711 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 OAS3Q9Y6K5 1087 aaKnown RBP6.72□□□□□ -1.33
HERC1-208ENST00000560462 DOCK9Q9BZ29 2069 aa6.72□□□□□ -1.33
HERC1-208ENST00000560462 SCN8AQ9UQD0 1980 aa6.71□□□□□ -1.33
HERC1-208ENST00000560462 H3BM21 787 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 PDE2AO00408 941 aaPredicted RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 CYB561D2O14569 222 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 COCHO43405 550 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 XPOTO43592 962 aaKnown RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 ATP2C2O75185 946 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 LRCH4O75427 683 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 TDP2O95551 362 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 HARSP12081 509 aaKnown RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 ACPPP15309 386 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 NME2P22392 152 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 MCM5P33992 734 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 ANTXR2P58335 489 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 NLRP5P59047 1200 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 HNRNPKP61978 463 aaKnown RBP eCLIP6.71□□□□□ -1.34
HERC1-208ENST00000560462 PPP2CBP62714 309 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 PPP2CAP67775 309 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 TLE4Q04727 773 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 PDIA5Q14554 519 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 LRRC14Q15048 493 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 EPHA7Q15375 998 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 ZBTB6Q15916 424 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 ZNF630Q2M218 657 aaPredicted RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 DEFB133Q30KQ1 61 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 CFAP221Q4G0U5 840 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 FNDC3BQ53EP0 1204 aaKnown RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 WSCD1Q658N2 575 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 CLEC9AQ6UXN8 241 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 PIK3AP1Q6ZUJ8 805 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 DENND5BQ6ZUT9 1274 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 REC114Q7Z4M0 266 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 ANKS1BQ7Z6G8 1248 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 SPATA2LQ8IUW3 424 aaPredicted RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 TPH2Q8IWU9 490 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 C19orf47Q8N9M1 422 aaKnown RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 ZNF548Q8NEK5 533 aaPredicted RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 MCPH1Q8NEM0 835 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 NCOA7Q8NI08 942 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 FBXO27Q8NI29 283 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 THAP3Q8WTV1 239 aaPredicted RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 BSNDQ8WZ55 320 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 WBP2Q969T9 261 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 SNRNP40Q96DI7 357 aaKnown RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 SPATA17Q96L03 361 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 FOXC2Q99958 501 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 OMDQ99983 421 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 PYM1Q9BRP8 204 aaKnown RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 KIFC3Q9BVG8 833 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 PRSS16Q9NQE7 514 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 DNAJC28Q9NX36 388 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 GPN3Q9UHW5 284 aaPredicted RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 PNMA8BQ9ULN7 279 aaPredicted RBP6.71□□□□□ -1.34
HERC1-208ENST00000560462 FZD4Q9ULV1 537 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 DMTF1Q9Y222 760 aa6.71□□□□□ -1.34
HERC1-208ENST00000560462 PRRC2AP48634 2157 aaKnown RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3DA0A087WVF3 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3IA0A087WXS9 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3EA0A087X179 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3KA0A087X1G2 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 ESYT3A0FGR9 886 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3FA6NER0 549 aaPredicted RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3LB9A6J9 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 PRAMEF26H0Y7S4 382 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TIMM44O43615 452 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 RAD1O60671 282 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 RPLP0P05388 317 aaKnown RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 HEXAP06865 529 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3HP0C7X1 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 MAPTP10636 758 aaKnown RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 BMP6P22004 513 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 PCSK6P29122 969 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 GNA11P29992 359 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 NUDT1P36639 197 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 RARRES1P49788 294 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 PMS2P54278 862 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 GYS2P54840 703 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 GPLD1P80108 840 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 RUNX1T1Q06455 604 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 CDK18Q07002 472 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 PCSK7Q16549 785 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.7□□□□□ -1.34
HERC1-208ENST00000560462 POM121L1PQ3SYA9 428 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 ZNF542PQ5EBM4 170 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3GQ6DHY5 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3CQ6IPX1 549 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 HTR3DQ70Z44 454 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 PARS2Q7L3T8 475 aaKnown RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 TBC1D3Q8IZP1 549 aaPredicted RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 TMTC2Q8N394 836 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 OR14C36Q8NHC7 312 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 NINJ1Q92982 152 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 CEP295NLQ96MC4 621 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 IL12RB2Q99665 862 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 ACO2Q99798 780 aaKnown RBP6.7□□□□□ -1.34
HERC1-208ENST00000560462 TTLL2Q9BWV7 592 aa6.7□□□□□ -1.34
HERC1-208ENST00000560462 CALN1Q9BXU9 219 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms