RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TIMM13Q9Y5L4 95 aaPredicted RBP9.91□□□□□ -0.82
RTF1-206ENST00000560447 DOCK4Q8N1I0 1966 aa9.91□□□□□ -0.82
RTF1-206ENST00000560447 ZCWPW2A0A1B0GU75 182 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 WDR91A4D1P6 747 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 OR6C75A6NL08 312 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 TMEM114B3SHH9 223 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 I6L893 689 aaPredicted RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 ZBTB24O43167 697 aaPredicted RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 SIN3BO75182 1162 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 ALDOAP04075 364 aaKnown RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 SERPINE1P05121 402 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 KRT16P08779 473 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 T-ENOLP0DO92 83 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 CD68P34810 354 aaPredicted RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 BRCC3P46736 316 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 AFF1P51825 1210 aaKnown RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 NDST2P52849 883 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 SLC5A3P53794 718 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 KCNJ2P63252 427 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 PDE1BQ01064 536 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 PRKCZQ05513 592 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 ZBTB16Q05516 673 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 TNK2Q07912 1038 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 MTM1Q13496 603 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 BMPR2Q13873 1038 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 CHI3L2Q15782 390 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 ANKRD20A4Q4UJ75 823 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 TAF1BQ53T94 588 aaPredicted RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 PLEKHG4Q58EX7 1191 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 PCID2Q5JVF3 399 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 SYCP2LQ5T4T6 812 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 MTDHQ86UE4 582 aaKnown RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 ATPAF2Q8N5M1 289 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 NPWQ8N729 165 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 RTL3Q8N8U3 475 aaKnown RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 DNAAF3Q8N9W5 541 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 SLC43A3Q8NBI5 491 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 OR52K1Q8NGK4 314 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 OR10T2Q8NGX3 314 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 RFWD2Q8NHY2 731 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 PXYLP1Q8TE99 480 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 ZNF669Q96BR6 464 aaPredicted RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 SLC7A6OSQ96CW6 309 aaPredicted RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 GLT1D1Q96MS3 346 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 GORASP1Q9BQQ3 440 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 PAAF1Q9BRP4 392 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 MCMBPQ9BTE3 642 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 PRKD2Q9BZL6 878 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 TRPV6Q9H1D0 765 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 ANLNQ9NQW6 1124 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 ENTPD7Q9NQZ7 604 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 TMPRSS4Q9NRS4 437 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 IL37Q9NZH6 218 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 PPARGC1AQ9UBK2 798 aaKnown RBP9.9□□□□□ -0.82
RTF1-206ENST00000560447 HEY2Q9UBP5 337 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 BAIAP2L1Q9UHR4 511 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 NEU3Q9UQ49 428 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 TLR6Q9Y2C9 796 aa9.9□□□□□ -0.82
RTF1-206ENST00000560447 NUP205Q92621 2012 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 A0A0G2JND7 137 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 FAM92AA1XBS5 289 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 KCNU1A8MYU2 1149 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 KCNK1O00180 336 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 TPP1O14773 563 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 UGT1A9O60656 530 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 PIAS1O75925 651 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 RTN3O95197 1032 aaPredicted RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 POMCP01189 267 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 PROCP04070 461 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 ALOX15P16050 662 aaPredicted RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 NFKB1P19838 968 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 TYK2P29597 1187 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 GRIK1P39086 918 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 CCNG1P51959 295 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 ACLYP53396 1101 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 ELAVL2Q12926 359 aaKnown RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 ZBTB17Q13105 803 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 NOGQ13253 232 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 MPP3Q13368 585 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 PDE1CQ14123 709 aaPredicted RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 FASTKD1Q53R41 847 aaKnown RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 TEDDM1Q5T9Z0 273 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 MBLAC2Q68D91 279 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 CLEC14AQ86T13 490 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 CNTN4Q8IWV2 1026 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 ARHGAP12Q8IWW6 846 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 COLGALT2Q8IYK4 626 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 NUP93Q8N1F7 819 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 UMODL1-AS1Q8N2C9 162 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 OR6Y1Q8NGX8 325 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 PPP1R14CQ8TAE6 165 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 ADAM32Q8TC27 787 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 PPP4R1Q8TF05 950 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 C2orf15Q8WU43 125 aaKnown RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 EDEM1Q92611 657 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 PTCD3Q96EY7 689 aaKnown RBP9.89□□□□□ -0.83
RTF1-206ENST00000560447 SLC39A13Q96H72 371 aa9.89□□□□□ -0.83
RTF1-206ENST00000560447 TBL1YQ9BQ87 522 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms