RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RWDD4Q6NW29 188 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 SCYL2Q6P3W7 929 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 DCUN1D2Q6PH85 259 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 SETD3Q86TU7 594 aaPredicted RBP11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 ZCCHC9Q8N567 271 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 SH2D3CQ8N5H7 860 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 FOXJ1Q92949 421 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 VCPIP1Q96JH7 1222 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 CNPY3Q9BT09 278 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 SPON2Q9BUD6 331 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 NUSAP1Q9BXS6 441 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 XPO4Q9C0E2 1151 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 MIR1-1HGQ9H1L0 117 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 OSBPL2Q9H1P3 480 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 NEUROG2Q9H2A3 272 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 TMEM9BQ9NQ34 198 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 PPARGC1AQ9UBK2 798 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 EIF2B4Q9UI10 523 aaKnown RBP11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 SLC25A13Q9UJS0 675 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 SARDHQ9UL12 918 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 SLC6A14Q9UN76 642 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 HS3ST2Q9Y278 367 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 ACTL7AQ9Y615 435 aa11.94□□□□□ -0.5
RABGGTA-216ENST00000560243 CEP295Q9C0D2 2601 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 CHD8Q9HCK8 2581 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 A0A1W2PQJ5 194 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 ILVBLA1L0T0 632 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 FAM47DPA6NHR8 397 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 RNF103O00237 685 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 CBX4O00257 560 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 BNIP3LO60238 219 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 RNASEH1O60930 286 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 RNASEH2AO75792 299 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 IL1BP01584 269 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 GYPCP04921 128 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 KCNA4P22459 653 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 ACVRL1P37023 503 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 DPP6P42658 865 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 VASPP50552 380 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 GNA12Q03113 381 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 SCAPQ12770 1279 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 ELAVL3Q14576 367 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 POM121L1PQ3SYA9 428 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 TTC31Q49AM3 519 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 PPM1JQ5JR12 505 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 WDR45BQ5MNZ6 344 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 C6orf118Q5T5N4 469 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 ACBD5Q5T8D3 534 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 TMC6Q7Z403 805 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 SLFN11Q7Z7L1 901 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 NLRP14Q86W24 1093 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 HDDC3Q8N4P3 179 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 ARFGAP1Q8N6T3 406 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 DCAF4L2Q8NA75 395 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 ATP11CQ8NB49 1132 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 C1orf216Q8TAB5 229 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 CEP76Q8TAP6 659 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 SNX19Q92543 992 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 NTAN1Q96AB6 310 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 BIRC7Q96CA5 298 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 PPP1R9BQ96SB3 815 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 C2orf49Q9BVC5 232 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 GTPBP2Q9BX10 602 aaKnown RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 BTBD1Q9H0C5 482 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 PARVAQ9NVD7 372 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 GPATCH2LQ9NWQ4 482 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 DNAI1Q9UI46 699 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 CAPN11Q9UMQ6 739 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 DOCK9Q9BZ29 2069 aa11.93□□□□□ -0.5
RABGGTA-216ENST00000560243 PLXNA2O75051 1894 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 ANKRD62A6NC57 917 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 TMEM191CA6NGB0 347 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 RTN2O75298 545 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 FSBPO95073 299 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 IGHV4-34P06331 123 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 CTSLP07711 333 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 GZMAP12544 262 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 RHOQP17081 205 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 C5AR1P21730 350 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 DRD3P35462 400 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 GALCP54803 685 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 KRT83P78385 493 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 ARF5P84085 180 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 ZBED6P86452 979 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 BNC1Q01954 994 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 GFPT1Q06210 699 aaPredicted RBP11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 UAP1L1Q3KQV9 507 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 TDRD12Q587J7 1177 aaKnown RBP11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 NCEH1Q6PIU2 408 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 USP30Q70CQ3 517 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 CHST14Q8NCH0 376 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 RNF214Q8ND24 703 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 OR2A12Q8NGT7 310 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 ZNF653Q96CK0 615 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 TBC1D31Q96DN5 1066 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 PEBP4Q96S96 227 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 OMDQ99983 421 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 ORAI3Q9BRQ5 295 aa11.92□□□□□ -0.5
RABGGTA-216ENST00000560243 PCED1AQ9H1Q7 454 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms