RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 PCOLCE2Q9UKZ9 415 aa17.33■□□□□ 0.36
PSEN1-224ENST00000559361 APOBEC2Q9Y235 224 aaKnown RBP17.33■□□□□ 0.36
PSEN1-224ENST00000559361 SHROOM3Q8TF72 1996 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 RCCD1A6NED2 376 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 GREM1O60565 184 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 DKK1O94907 266 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 ATP11AP98196 1134 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 GRIK2Q13002 908 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 NME3Q13232 169 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 SYCP2LQ5T4T6 812 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 DBX2Q6ZNG2 339 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 HTR3DQ70Z44 454 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 SYCE1Q8N0S2 351 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 HNRNPLLQ8WVV9 542 aaKnown RBP17.32■□□□□ 0.36
PSEN1-224ENST00000559361 NTAN1Q96AB6 310 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 MRGPRX1Q96LB2 322 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 IRX2Q9BZI1 471 aaPredicted RBP17.32■□□□□ 0.36
PSEN1-224ENST00000559361 LACRTQ9GZZ8 138 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 SFMBT1Q9UHJ3 866 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 SH3BP1Q9Y3L3 701 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
PSEN1-224ENST00000559361 KALRNO60229 2985 aa17.32■□□□□ 0.36
PSEN1-224ENST00000559361 MDM4O15151 490 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 STC2O76061 302 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 ZNF883P0CG24 379 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 GNSP15586 552 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 SLC11A2P49281 568 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 NAP1L1P55209 391 aaKnown RBP17.31■□□□□ 0.36
PSEN1-224ENST00000559361 OGDHQ02218 1023 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 ANO4Q32M45 955 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 WDR45BQ5MNZ6 344 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 OTUD1Q5VV17 481 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-224ENST00000559361 TMPRSS7Q7RTY8 843 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 METTL3Q86U44 580 aaKnown RBP17.31■□□□□ 0.36
PSEN1-224ENST00000559361 PSTKQ8IV42 348 aaKnown RBP17.31■□□□□ 0.36
PSEN1-224ENST00000559361 RGL4Q8IZJ4 473 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 ATP6V0D2Q8N8Y2 350 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 BAHD1Q8TBE0 780 aaPredicted RBP17.31■□□□□ 0.36
PSEN1-224ENST00000559361 ADAM32Q8TC27 787 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 RNF34Q969K3 372 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 BTN2A3PQ96KV6 586 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 DDX50Q9BQ39 737 aaKnown RBP17.31■□□□□ 0.36
PSEN1-224ENST00000559361 WDCPQ9H6R7 721 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 KCND1Q9NSA2 647 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 PIGVQ9NUD9 493 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 RAXQ9Y2V3 346 aa17.31■□□□□ 0.36
PSEN1-224ENST00000559361 PTPRQQ9UMZ3 2332 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 PRRT4C9JH25 899 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 GFRA2O00451 464 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 ZBTB24O43167 697 aaPredicted RBP17.3■□□□□ 0.36
PSEN1-224ENST00000559361 MSI1O43347 362 aaKnown RBP17.3■□□□□ 0.36
PSEN1-224ENST00000559361 CACNG3O60359 315 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 MAOBP27338 520 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 HDAC4P56524 1084 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 PITX1P78337 314 aaPredicted RBP17.3■□□□□ 0.36
PSEN1-224ENST00000559361 HADHQ16836 314 aaKnown RBP17.3■□□□□ 0.36
PSEN1-224ENST00000559361 CDO1Q16878 200 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 C15orf59Q2T9L4 293 aaPredicted RBP17.3■□□□□ 0.36
PSEN1-224ENST00000559361 GRAMD4Q6IC98 578 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 SDE2Q6IQ49 451 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 CHPFQ8IZ52 775 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 TPCN2Q8NHX9 752 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 COL26A1Q96A83 441 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 FCRL2Q96LA5 508 aaPredicted RBP17.3■□□□□ 0.36
PSEN1-224ENST00000559361 ALS2CR12Q96Q35 445 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 TRIM7Q9C029 511 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 TOR4AQ9NXH8 423 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 ARHGEF38Q9NXL2 777 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 WSB2Q9NYS7 404 aaPredicted RBP17.3■□□□□ 0.36
PSEN1-224ENST00000559361 MARK1Q9P0L2 795 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 STOML2Q9UJZ1 356 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 NUMA1Q14980 2115 aa17.3■□□□□ 0.36
PSEN1-224ENST00000559361 A0A1B0GTW7 788 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 KCNU1A8MYU2 1149 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 PRPSAP2O60256 369 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 NDUFS2O75306 463 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 LRCH4O75427 683 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 CISD3P0C7P0 127 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 CORO1AP31146 461 aaKnown RBP17.29■□□□□ 0.36
PSEN1-224ENST00000559361 ZNF135P52742 658 aaPredicted RBP17.29■□□□□ 0.36
PSEN1-224ENST00000559361 Q6ZNB5 142 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 POLNQ7Z5Q5 900 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 HAPLN3Q96S86 360 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 SLC6A17Q9H1V8 727 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 DNAJC17Q9NVM6 304 aaKnown RBP17.29■□□□□ 0.36
PSEN1-224ENST00000559361 CACNA2D2Q9NY47 1150 aa17.29■□□□□ 0.36
PSEN1-224ENST00000559361 SYNJ2BP-COX16A0A087WUM0 186 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 MACROD2A1Z1Q3 448 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 BUB1BO60566 1050 aaPredicted RBP17.28■□□□□ 0.36
PSEN1-224ENST00000559361 KRT7P08729 469 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 TFE3P19532 575 aaPredicted RBP17.28■□□□□ 0.36
PSEN1-224ENST00000559361 MSNP26038 577 aaKnown RBP17.28■□□□□ 0.36
PSEN1-224ENST00000559361 CD6P30203 668 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 CHKAP35790 457 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 BNC1Q01954 994 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 MESDQ14696 234 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 BOLA3Q53S33 107 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 ZC3H12AQ5D1E8 599 aaKnown RBP17.28■□□□□ 0.36
PSEN1-224ENST00000559361 LRRC38Q5VT99 294 aa17.28■□□□□ 0.36
PSEN1-224ENST00000559361 DAAM2Q86T65 1068 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms