RNA–Protein interactions for RNA: ENST00000559276.5

USP3-212, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-212ENST00000559276 EFEMP1Q12805 493 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 GRIK2Q13002 908 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 ZNF234Q14588 700 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 ITIH4Q14624 930 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 ASIC2Q16515 512 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 ZNF394Q53GI3 561 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 PM20D1Q6GTS8 502 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 CYB5D1Q6P9G0 228 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 DBX2Q6ZNG2 339 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 KIAA0907Q7Z7F0 614 aaPredicted RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 SLFN11Q7Z7L1 901 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 SLCO6A1Q86UG4 719 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 PIGZQ86VD9 579 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 TRIM59Q8IWR1 403 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 PARP9Q8IXQ6 854 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 CPXM2Q8N436 756 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 UBR7Q8N806 425 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 GBP7Q8N8V2 638 aaPredicted RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 BAHD1Q8TBE0 780 aaPredicted RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 CASKIN2Q8WXE0 1202 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 ZCCHC14Q8WYQ9 949 aaKnown RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 PGM2Q96G03 612 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 EEF2KMTQ96G04 330 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 TOE1Q96GM8 510 aaKnown RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 GDAP1L1Q96MZ0 367 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 XPO6Q96QU8 1125 aaKnown RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 ZSWIM1Q9BR11 485 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 TMEM109Q9BVC6 243 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 SLC32A1Q9H598 525 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 SLC40A1Q9NP59 571 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 CISHQ9NSE2 258 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 TOR4AQ9NXH8 423 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 NFS1Q9Y697 457 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 TP53BP1Q12888 1972 aaPredicted RBP6.07□□□□□ -1.44
USP3-212ENST00000559276 ADAMTS20P59510 1910 aa6.07□□□□□ -1.44
USP3-212ENST00000559276 FAM208BQ5VWN6 2430 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 METTL12A8MUP2 240 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 C10orf142B7Z368 130 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 EPHB6O15197 1021 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 SLC16A3O15427 465 aaKnown RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 RAD51CO43502 376 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 CALUO43852 315 aaPredicted RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 MGRN1O60291 552 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 PPFIA2O75334 1257 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 DKK1O94907 266 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 PLEKP08567 350 aaPredicted RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 FTH1P19P0C7X4 201 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 NCAM1P13591 858 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 HLA-EP13747 358 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 HOXD9P28356 352 aaPredicted RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 HLA-FP30511 346 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 PSEN1P49768 467 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 KLK7P49862 253 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 ATP1A2P50993 1020 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 GUCY1A3Q02108 690 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 ZNF844Q08AG5 666 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 IFT88Q13099 833 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 SLC14A1Q13336 389 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 ADAM9Q13443 819 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 DHX34Q14147 1143 aaKnown RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 HLTFQ14527 1009 aaKnown RBP eCLIP6.06□□□□□ -1.44
USP3-212ENST00000559276 TRIP4Q15650 581 aaPredicted RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 TRIP6Q15654 476 aaKnown RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 PTPRNQ16849 979 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 PLEKHG6Q3KR16 790 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 CBWD6Q4V339 395 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 PKDCCQ504Y2 493 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 ANKRD20A8PQ5CZ79 823 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 CBWD3Q5JTY5 395 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 KCNT1Q5JUK3 1230 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 CBWD5Q5RIA9 395 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 RNF187Q5TA31 235 aaPredicted RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 ARHGAP17Q68EM7 881 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 SDE2Q6IQ49 451 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 KIAA1324Q6UXG2 1013 aaKnown RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 NUDT18Q6ZVK8 323 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 INTS8Q75QN2 995 aaKnown RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 RABEPKQ7Z6M1 372 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 GLRX5Q86SX6 157 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 TMPRSS6Q8IU80 811 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 DENND1CQ8IV53 801 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 NAXDQ8IW45 347 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 FAM186BQ8IYM0 893 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 ZCCHC9Q8N567 271 aaKnown RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 PNPLA1Q8N8W4 532 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 LRRC57Q8N9N7 239 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 WFDC5Q8TCV5 224 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 ADAMTS14Q8WXS8 1223 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 IFT81Q8WYA0 676 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 TLCD1Q96CP7 247 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 CHMP6Q96FZ7 201 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 TMEM176AQ96HP8 235 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 SEC16BQ96JE7 1060 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 LMLNQ96KR4 655 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 KRT12Q99456 494 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 ORAI3Q9BRQ5 295 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 GPR174Q9BXC1 333 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 TMEM245Q9H330 911 aa6.06□□□□□ -1.44
USP3-212ENST00000559276 FAM124BQ9H5Z6 455 aaPredicted RBP6.06□□□□□ -1.44
USP3-212ENST00000559276 PRDM16Q9HAZ2 1276 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms