RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MRGPRX1Q96LB2 322 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 NCAPGQ9BPX3 1015 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 HERPUD2Q9BSE4 406 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 SLC39A8Q9C0K1 460 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 MUC3BQ9H195 1237 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 KCNH6Q9H252 994 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 RETREG1Q9H6L5 497 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 VPS28Q9UK41 221 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 HS3ST2Q9Y278 367 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 ALG6Q9Y672 507 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 R4GN57 208 aa11.71□□□□□ -0.53
SNX1-204ENST00000559061 RASA4BC9J798 803 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 FGF10O15520 208 aaPredicted RBP11.7□□□□□ -0.54
SNX1-204ENST00000559061 ARHGAP6O43182 974 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 RASA4O43374 803 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 HRO43593 1189 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 SIN3BO75182 1162 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 MOCS3O95396 460 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 APBB3O95704 486 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 PEX11BO96011 259 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 DGKEP52429 567 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 CDH6P55285 790 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 NHLH1Q02575 133 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 ADCY2Q08462 1091 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 NUMA1Q14980 2115 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 HNRNPA1L2Q32P51 320 aaKnown RBP11.7□□□□□ -0.54
SNX1-204ENST00000559061 LRRC38Q5VT99 294 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 NCBP2-AS2Q69YL0 99 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 SERPINA13PQ6UXR4 307 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 LEKR1Q6ZMV7 388 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 TRMT11Q7Z4G4 463 aaKnown RBP11.7□□□□□ -0.54
SNX1-204ENST00000559061 WDR5BQ86VZ2 330 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 KDM1BQ8NB78 822 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 TSTD1Q8NFU3 115 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 ZNF830Q96NB3 372 aaPredicted RBP11.7□□□□□ -0.54
SNX1-204ENST00000559061 FAM129BQ96TA1 746 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 TPSD1Q9BZJ3 242 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 ATP13A1Q9HD20 1204 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 MBD1Q9UIS9 605 aaPredicted RBP11.7□□□□□ -0.54
SNX1-204ENST00000559061 SLC8A2Q9UPR5 921 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 CEP192Q8TEP8 1941 aa11.7□□□□□ -0.54
SNX1-204ENST00000559061 C10orf142B7Z368 130 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 H3BRJ5 948 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 J3KR12 359 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 NPC1O15118 1278 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 KDELR3O43731 214 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 MFSD11O43934 449 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 RAMP2O60895 175 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 ATP5BP06576 529 aaKnown RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 EPHX1P07099 455 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 CTSLP07711 333 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 BCKDHBP21953 392 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 KDELR1P24390 212 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 SSR1P43307 286 aaKnown RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 NOP2P46087 812 aaKnown RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 SERPINH1P50454 418 aaKnown RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 PTPN5P54829 565 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 OXCT1P55809 520 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 SLC10A2Q12908 348 aaPredicted RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 SERINC3Q13530 473 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 MAP7D1Q3KQU3 841 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 ANKRD20A8PQ5CZ79 823 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 NUDT18Q6ZVK8 323 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 Q6ZVU0 165 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 NT5DC3Q86UY8 548 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 CAMKK1Q8N5S9 505 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 FAM160A2Q8N612 972 aaPredicted RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 PLD5Q8N7P1 536 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 CCDC112Q8NEF3 446 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 CCDC26Q8TAB7 109 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 UCMAQ8WVF2 138 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 HMGB4Q8WW32 186 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 ALG3Q92685 438 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 NSMCE3Q96MG7 304 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 ZNF670Q9BS34 389 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 SPON2Q9BUD6 331 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 MAGEH1Q9H213 219 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 CATSPERBQ9H7T0 1116 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 ZSCAN32Q9NX65 697 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 RCOR3Q9P2K3 495 aaPredicted RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 LCMT1Q9UIC8 334 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 FCF1Q9Y324 198 aaKnown RBP11.69□□□□□ -0.54
SNX1-204ENST00000559061 HCN4Q9Y3Q4 1203 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 ABCA7Q8IZY2 2146 aa11.69□□□□□ -0.54
SNX1-204ENST00000559061 CCDC163A0A0D9SF12 145 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 MACROD2A1Z1Q3 448 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 CBX4O00257 560 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 AXIN1O15169 862 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 KRT7P08729 469 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 DESP17661 470 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 NBL1P41271 181 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 SLC1A1P43005 524 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 PEX5P50542 639 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 PAPOLAP51003 745 aaKnown RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 ZNF135P52742 658 aaPredicted RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 NDST2P52849 883 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 RPS14P62263 151 aaKnown RBP11.68□□□□□ -0.54
SNX1-204ENST00000559061 KRT83P78385 493 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 GBE1Q04446 702 aa11.68□□□□□ -0.54
SNX1-204ENST00000559061 SULT2A1Q06520 285 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms