RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ASCC3Q8N3C0 2202 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 ILVBLA1L0T0 632 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 TYW5A2RUC4 315 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 WASH4PA8MWX3 477 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 WNT9AO14904 365 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 MID1O15344 667 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 RHOBTB1O94844 696 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 ASLP04424 464 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 ATP5BP06576 529 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 RHOCP08134 193 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 CD48P09326 243 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 RHOQP17081 205 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 FECHP22830 423 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 BNC1Q01954 994 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 GNA12Q03113 381 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 DLG2Q15700 870 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 ELF2Q15723 593 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 SLC18A3Q16572 532 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 KCNT1Q5JUK3 1230 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 FAM182AQ5T1J6 154 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 AFMIDQ63HM1 303 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 DCUN1D2Q6PH85 259 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 KIAA1324Q6UXG2 1013 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 ARHGAP36Q6ZRI8 547 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 Q6ZVU0 165 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 SND1Q7KZF4 910 aaKnown RBP eCLIP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 C11orf74Q86VG3 221 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 OR2A12Q8NGT7 310 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 TSC1Q92574 1164 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 SIPA1Q96FS4 1042 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 NUP85Q9BW27 656 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 C6orf106Q9H6K1 298 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 LRRC19Q9H756 370 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 CAAP1Q9H8G2 361 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 CWC15Q9P013 229 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 SALL4Q9UJQ4 1053 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 PILRBQ9UKJ0 227 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 PLA2G4CQ9UP65 541 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 REXO2Q9Y3B8 237 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 KNL1Q8NG31 2342 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 LRRK1Q38SD2 2015 aa12.95□□□□□ -0.34
RABGGTA-207ENST00000558936 ANKRD36A6QL64 1941 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 A0A0U1RQJ8 604 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 SSU72P8A0A1W2PR75 194 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 TM4SF5O14894 197 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 CBFA2T2O43439 604 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 ZNF806P0C7X5 589 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 RARAP10276 462 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 GOT1P17174 413 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 OR1E1P30953 314 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 GKP32189 559 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 MPLP40238 635 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 TAS2R38P59533 333 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 MTA1Q13330 715 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 BYSLQ13895 437 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 DPYSQ14117 519 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 STARD3Q14849 445 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 E2F5Q15329 346 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 PRR23CQ6ZRP0 262 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 FAM124AQ86V42 546 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 TMEM139Q8IV31 216 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 MMAAQ8IVH4 418 aaKnown RBP12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 NIPA2Q8N8Q9 360 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 DCAF4L2Q8NA75 395 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 FAM71BQ8TC56 605 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 IQCDQ96DY2 449 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 NEUROG2Q9H2A3 272 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 NHEJ1Q9H9Q4 299 aaPredicted RBP12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 VPS28Q9UK41 221 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 PPM1HQ9ULR3 514 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 USP18Q9UMW8 372 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 AP4E1Q9UPM8 1137 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 PCDHGA5Q9Y5G8 931 aa12.94□□□□□ -0.34
RABGGTA-207ENST00000558936 SHROOM3Q8TF72 1996 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 TARSL2A2RTX5 802 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 ANKRD62A6NC57 917 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 CDX4O14627 284 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 ZBTB24O43167 697 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 MAP3K13O43283 966 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 CREB3O43889 395 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 SYNCRIPO60506 623 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 GJB3O75712 270 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 IGHV4-34P06331 123 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 CD6P30203 668 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 IRX4P78413 519 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 CREB5Q02930 508 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 ZNF33AQ06730 810 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 CST6Q15828 149 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 SMTNL2Q2TAL5 461 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 ERMARDQ5T6L9 678 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 RWDD4Q6NW29 188 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 CCDC117Q8IWD4 279 aaPredicted RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 RTL3Q8N8U3 475 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 ARRDC3Q96B67 414 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 TBC1D31Q96DN5 1066 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 HMCESQ96FZ2 354 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 SPACA7Q96KW9 195 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 GPR174Q9BXC1 333 aa12.93□□□□□ -0.34
RABGGTA-207ENST00000558936 TRIM5Q9C035 493 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms