RNA–Protein interactions for RNA: ENST00000558528.1

LDLR-209, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 456 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-209ENST00000558528 GHRP10912 638 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TNNT1P13805 278 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CYP11B1P15538 503 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 DESP17661 470 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 PTPN1P18031 435 aaKnown RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 CAPN3P20807 821 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 FGFR4P22455 802 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CD52P31358 61 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CASQ1P31415 396 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 GPR15P49685 360 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TAF6P49848 677 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 LGALS4P56470 323 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 SLC8A3P57103 927 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 MYL6P60660 151 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CDR2Q01850 454 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 LPIN1Q14693 890 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TOMM20Q15388 145 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ASTE1Q2TB18 679 aaPredicted RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 WDR72Q3MJ13 1102 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ZBTB41Q5SVQ8 909 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CCDC122Q5T0U0 273 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 UBXN11Q5T124 520 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 LIN9Q5TKA1 542 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 HIBCHQ6NVY1 386 aaPredicted RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 DPY19L2P1Q6NXN4 242 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 FAM180BQ6P0A1 224 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ALKBH5Q6P6C2 394 aaKnown RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 GLB1LQ6UWU2 654 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 RAD9BQ6WBX8 426 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 DSTYKQ6XUX3 929 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 SYDE1Q6ZW31 735 aaPredicted RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 H2AFVQ71UI9 128 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 THAP5Q7Z6K1 395 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CDR2LQ86X02 465 aaPredicted RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 METTL23Q86XA0 190 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ECHDC2Q86YB7 292 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TRIM48Q8IWZ4 208 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 RHOT2Q8IXI1 618 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ABI1Q8IZP0 508 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 SYCE1Q8N0S2 351 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TMEM86AQ8N2M4 240 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CCDC33Q8N5R6 958 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TRIM58Q8NG06 486 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 OR5B17Q8NGF7 314 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TSPEARQ8WU66 669 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 FBLIM1Q8WUP2 373 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 CTNNBL1Q8WYA6 563 aaPredicted RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 SEMA4DQ92854 862 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 SECISBP2LQ93073 1101 aaKnown RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 VCPIP1Q96JH7 1222 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 PPP1R13BQ96KQ4 1090 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 NOX5Q96PH1 765 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 MMS19Q96T76 1030 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ADAM2Q99965 735 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ADI1Q9BV57 179 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 FOXP3Q9BZS1 431 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 MTMR12Q9C0I1 747 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TRPV6Q9H1D0 765 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 DUSP15Q9H1R2 295 aaPredicted RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 RSPH9Q9H1X1 276 aaPredicted RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 AKTIPQ9H8T0 292 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 WASH6PQ9NQA3 447 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 SERHLQ9NQF3 203 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 C1GALT1Q9NS00 363 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 TRMT1Q9NXH9 659 aaKnown RBP5.36□□□□□ -1.55
LDLR-209ENST00000558528 GDAP2Q9NXN4 497 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 MARCH2Q9P0N8 246 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ARHGAP20Q9P2F6 1191 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 STK39Q9UEW8 545 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 PYCARDQ9ULZ3 195 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 PCDHB7Q9Y5E2 793 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 PCDHGB2Q9Y5G2 931 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 UMODL1Q5DID0 1318 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 ZNF292O60281 2723 aa5.36□□□□□ -1.55
LDLR-209ENST00000558528 LCTP09848 1927 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 KIAA1217Q5T5P2 1943 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 FAM95CA0A1B0GW59 222 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 A0A1W2PPL8 197 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 KPNA7A9QM74 516 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 C22orf46C9J442 243 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 PIRO00625 290 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 APOL1O14791 398 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 INPPL1O15357 1258 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 CYP26A1O43174 497 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 RTN2O75298 545 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 VNN1O95497 513 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 LSM8O95777 96 aaKnown RBP5.35□□□□□ -1.55
LDLR-209ENST00000558528 CXCL10P02778 98 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 LPLP06858 475 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 VSIG8P0DPA2 414 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 HSPA7P48741 367 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 LHX1P48742 406 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 ALDH9A1P49189 494 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 MAP2K6P52564 334 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 GNG11P61952 73 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 GPC5P78333 572 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 ROM1Q03395 351 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 TAP1Q03518 808 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 GOLGA8FQ08AF8 430 aa5.35□□□□□ -1.55
LDLR-209ENST00000558528 GOLGA8DPQ0D2H9 430 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms