RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 CPA1P15085 419 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 CST5P28325 142 aaPredicted RBP3.68□□□□□ -1.82
SPG11-206ENST00000558093 AARSP49588 968 aaKnown RBP eCLIP3.68□□□□□ -1.82
SPG11-206ENST00000558093 THBS3P49746 956 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 RPS6KA3P51812 740 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 GOLGA8FQ08AF8 430 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 DCTN1Q14203 1278 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 Q5PR19 223 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 WASHC2DQ5SRD0 308 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 ANKRD45Q5TZF3 282 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 ASPHD1Q5U4P2 390 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 JMJD6Q6NYC1 403 aaPredicted RBP3.68□□□□□ -1.82
SPG11-206ENST00000558093 GALNT7Q86SF2 657 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 GPSM1Q86YR5 675 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 FBXL14Q8N1E6 418 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 GALNT15Q8N3T1 639 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 CSGALNACT1Q8TDX6 532 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 THAP4Q8WY91 577 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 INPP5DQ92835 1189 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 SLC39A13Q96H72 371 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 FAM167BQ9BTA0 163 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 DDX23Q9BUQ8 820 aaKnown RBP3.68□□□□□ -1.82
SPG11-206ENST00000558093 B3GNT4Q9C0J1 378 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 HIPK2Q9H2X6 1198 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 ABHD16BQ9H3Z7 469 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 PLEKHA2Q9HB19 425 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 IL21RQ9HBE5 538 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 Q9N2J8 555 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 TMEM248Q9NWD8 314 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 HIF1ANQ9NWT6 349 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 KLQ9UEF7 1012 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 SRP68Q9UHB9 627 aaKnown RBP3.68□□□□□ -1.82
SPG11-206ENST00000558093 CDH22Q9UJ99 828 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 DHDHQ9UQ10 334 aa3.68□□□□□ -1.82
SPG11-206ENST00000558093 TRBV5-7A0A0A0MS05 114 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 FAM90A20PA6NIJ5 464 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 LDHAP00338 332 aaKnown RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 TFRCP02786 760 aaKnown RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 FCGR2AP12318 317 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 ACP5P13686 325 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 CHN1P15882 459 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 HOXB6P17509 224 aaKnown RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 TNFSF8P32971 234 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 PNPLA4P41247 253 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 SKIV2L2P42285 1042 aaKnown RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 CUL4BQ13620 913 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 KRT72Q14CN4 511 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 SMAD1Q15797 465 aaKnown RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 ADCK5Q3MIX3 580 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 TUBB8Q3ZCM7 444 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 OTUD1Q5VV17 481 aaPredicted RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 KIAA1161Q6NSJ0 714 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 SLC16A12Q6ZSM3 486 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 BHLHA9Q7RTU4 235 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 CTU1Q7Z7A3 348 aaKnown RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 PALB2Q86YC2 1186 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 GABPB2Q8TAK5 448 aaPredicted RBP3.67□□□□□ -1.82
SPG11-206ENST00000558093 C2CD4CQ8TF44 421 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 AFG1LQ8WV93 481 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 OIT3Q8WWZ8 545 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 TRIM63Q969Q1 353 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 MARK4Q96L34 752 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 FRG2BQ96QU4 278 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 TMEM204Q9BSN7 226 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 ARHGAP39Q9C0H5 1083 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.67□□□□□ -1.82
SPG11-206ENST00000558093 CATSPERBQ9H7T0 1116 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 CHODLQ9H9P2 273 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 G6PC2Q9NQR9 355 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 THAP1Q9NVV9 213 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 KIF17Q9P2E2 1029 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 UPB1Q9UBR1 384 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 MYO6Q9UM54 1294 aa3.67□□□□□ -1.82
SPG11-206ENST00000558093 STMND1H3BQB6 276 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 SPTLC2O15270 562 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 SMAD6O43541 496 aaKnown RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 PEX14O75381 377 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 CBX6O95503 412 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 CSF1P09603 554 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 VEGFAP15692 232 aaPredicted RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 CHRNB2P17787 502 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 PRKCHP24723 683 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 CCKARP32238 428 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 RFX2P48378 723 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 CLCNKBP51801 687 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 NANOS2P60321 138 aaKnown RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 THOC5Q13769 683 aaKnown RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 POSTNQ15063 836 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 PLK5Q496M5 336 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 VWA5B1Q5TIE3 1220 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 TMEM268Q5VZI3 342 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 PDXDC1Q6P996 788 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.66□□□□□ -1.82
SPG11-206ENST00000558093 WDR5BQ86VZ2 330 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 BRSK2Q8IWQ3 736 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 CADM3Q8N126 398 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 HORMAD2Q8N7B1 307 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 FAR1Q8WVX9 515 aa3.66□□□□□ -1.82
SPG11-206ENST00000558093 KTI12Q96EK9 354 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms