RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 TRHDEQ9UKU6 1024 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 FAM50BQ9Y247 325 aa17.24■□□□□ 0.35
SNX1-203ENST00000558040 KIF26AQ9ULI4 1882 aaPredicted RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 CDH23Q9H251 3354 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 UQCRHLA0A096LP55 91 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 A0A0A0MRY4 1105 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 A0A0D9SEW6 157 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 ZSCAN5CA6NGD5 496 aaPredicted RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 ANHXE9PGG2 379 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 KCNK1O00180 336 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 CHADO15335 359 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 KDELR3O43731 214 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 PRAMEF11O60813 436 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 OPHN1O60890 802 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 UQCRHP07919 91 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 CCNB1P14635 433 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 ARSAP15289 507 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 ADCY8P40145 1251 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 CSKP41240 450 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 DRG2P55039 364 aaKnown RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 IFI35P80217 286 aaPredicted RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 HTR4Q13639 388 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 GRM2Q14416 872 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 FSCBQ5H9T9 825 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 DUPD1Q68J44 220 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 ARHGAP36Q6ZRI8 547 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 ARHGEF18Q6ZSZ5 1173 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 DCAF4L2Q8NA75 395 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 BBOF1Q8ND07 529 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 OR52K2Q8NGK3 314 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 SPATA13Q96N96 652 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 ZNF599Q96NL3 588 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 FEM1AQ9BSK4 669 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 C2orf49Q9BVC5 232 aaPredicted RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 PHF7Q9BWX1 381 aaPredicted RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 ACE2Q9BYF1 805 aaPredicted RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 PLA2G2FQ9BZM2 168 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 TRIM31Q9BZY9 425 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 EBF3Q9H4W6 596 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 FAM114A2Q9NRY5 505 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 KLHL8Q9P2G9 620 aaPredicted RBP17.23■□□□□ 0.35
SNX1-203ENST00000558040 VPS28Q9UK41 221 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 NUMBLQ9Y6R0 609 aa17.23■□□□□ 0.35
SNX1-203ENST00000558040 CACNG3O60359 315 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ETS1P14921 441 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 SP100P23497 879 aaPredicted RBP17.22■□□□□ 0.35
SNX1-203ENST00000558040 PTPN3P26045 913 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 RPL22P35268 128 aaKnown RBP17.22■□□□□ 0.35
SNX1-203ENST00000558040 VPS41P49754 854 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 RENBPP51606 427 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 WASHC5Q12768 1159 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 LMAN2Q12907 356 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 GPS1Q13098 491 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 CALCOCO2Q13137 446 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 CUL1Q13616 776 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 HNRNPDQ14103 355 aaKnown RBP17.22■□□□□ 0.35
SNX1-203ENST00000558040 DMC1Q14565 340 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ANKRD20A2Q5SQ80 823 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ANKRD20A1Q5TYW2 823 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ANKRD20A3Q5VUR7 823 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ITPRIPL1Q6GPH6 555 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 BBS5Q8N3I7 341 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ST13P5Q8NFI4 369 aaPredicted RBP17.22■□□□□ 0.35
SNX1-203ENST00000558040 WFDC5Q8TCV5 224 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 SEC14L1Q92503 715 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 MAML1Q92585 1016 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 NXPE3Q969Y0 559 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 SNF8Q96H20 258 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ZFYVE19Q96K21 471 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 DPH5Q9H2P9 285 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 ECT2Q9H8V3 914 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 GDF3Q9NR23 364 aa17.22■□□□□ 0.35
SNX1-203ENST00000558040 NYNRINQ9P2P1 1898 aaKnown RBP17.22■□□□□ 0.35
SNX1-203ENST00000558040 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.21■□□□□ 0.35
SNX1-203ENST00000558040 C2CD4DB7Z1M9 353 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 J3KR12 359 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 CBX4O00257 560 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 ZSCAN5DPP0CG00 497 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 MZF1P28698 734 aaPredicted RBP17.21■□□□□ 0.35
SNX1-203ENST00000558040 GDI1P31150 447 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 PLK1P53350 603 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 GEMIN4P57678 1058 aaKnown RBP17.21■□□□□ 0.35
SNX1-203ENST00000558040 RUNX3Q13761 415 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 RFTN1Q14699 578 aaPredicted RBP17.21■□□□□ 0.35
SNX1-203ENST00000558040 SMAD2Q15796 467 aaKnown RBP17.21■□□□□ 0.35
SNX1-203ENST00000558040 TEX44Q53QW1 395 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 TMCO4Q5TGY1 634 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 MARC1Q5VT66 337 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 WDR93Q6P2C0 686 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 PID1Q7Z2X4 250 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 PCGF5Q86SE9 256 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 GLIS1Q8NBF1 620 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 CCDC110Q8TBZ0 833 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 ACDQ96AP0 544 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 FAM129AQ9BZQ8 928 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 EPC1Q9H2F5 836 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 HPS4Q9NQG7 708 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 ABCB8Q9NUT2 735 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 WHRNQ9P202 907 aa17.21■□□□□ 0.35
SNX1-203ENST00000558040 UBA2Q9UBT2 640 aaPredicted RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms