RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 OSGEPQ9NPF4 335 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 PRSS16Q9NQE7 514 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 DONSONQ9NYP3 566 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 VPS28Q9UK41 221 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 FZD4Q9ULV1 537 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 ERVW-1Q9UQF0 538 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 PCDHGA11Q9Y5H2 935 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 HS3ST4Q9Y661 456 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 FRYLO94915 3013 aa11.74□□□□□ -0.53
LINC00648-204ENST00000557749 A0A1W2PQC6 194 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 DCDC2BA2VCK2 349 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 LRRC72A6NJI9 287 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 METTL12A8MUP2 240 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 UPK3BL1B0FP48 263 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 UPK3BL2E5RIL1 263 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 GOLGA8SH3BPF8 625 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 ALOX15BO15296 676 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 OPHN1O60890 802 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 SEMA4FO95754 770 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 HLA-EP13747 358 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 ENGP17813 658 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 NUDT1P36639 197 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 CTSOP43234 321 aaPredicted RBP11.73□□□□□ -0.53
LINC00648-204ENST00000557749 RPS14P62263 151 aaKnown RBP11.73□□□□□ -0.53
LINC00648-204ENST00000557749 IRX4P78413 519 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 KLHL40Q2TBA0 621 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 TCEAL6Q6IPX3 200 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 CAVIN1Q6NZI2 390 aaKnown RBP11.73□□□□□ -0.53
LINC00648-204ENST00000557749 STRADAQ7RTN6 431 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 PHF13Q86YI8 300 aaPredicted RBP11.73□□□□□ -0.53
LINC00648-204ENST00000557749 WFDC5Q8TCV5 224 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 GANCQ8TET4 914 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 CPA5Q8WXQ8 436 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 TCEAL3Q969E4 200 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 MUC3BQ9H195 1237 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 PABPC3Q9H361 631 aaKnown RBP11.73□□□□□ -0.53
LINC00648-204ENST00000557749 CAPN10Q9HC96 672 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 PIGVQ9NUD9 493 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 SEPT11Q9NVA2 429 aaKnown RBP11.73□□□□□ -0.53
LINC00648-204ENST00000557749 ADAM22Q9P0K1 906 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 TMEM63CQ9P1W3 806 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 XPO7Q9UIA9 1087 aaKnown RBP11.73□□□□□ -0.53
LINC00648-204ENST00000557749 TMEM59LQ9UK28 342 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 TBC1D30Q9Y2I9 924 aa11.73□□□□□ -0.53
LINC00648-204ENST00000557749 PI4KAP42356 2102 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 TNRC6BQ9UPQ9 1833 aaKnown RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 MUC22E2RYF6 1773 aaPredicted RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 WDR87Q6ZQQ6 2873 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 C4orf47A7E2U8 309 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 C1QTNF3-AMACRE9PGA6 284 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 SLC7A4O43246 635 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 CER1O95813 267 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 RHOCP08134 193 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 ADRB1P08588 477 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 KRT3P12035 628 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 BMP2P12643 396 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 CEACAM1P13688 526 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 PDGFRAP16234 1089 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 C5AR1P21730 350 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 PTPN9P43378 593 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 AFF3P51826 1226 aaKnown RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 AIF1P55008 147 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 GEMIN4P57678 1058 aaKnown RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 FMO1Q01740 532 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 NRG1Q02297 640 aaPredicted RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 SLC20A2Q08357 652 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 NCAPHQ15003 741 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 CST6Q15828 149 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 FSCBQ5H9T9 825 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 RETSATQ6NUM9 610 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 MMS22LQ6ZRQ5 1243 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 SLC41A1Q8IVJ1 513 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 FRMD1Q8N878 549 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 DCAF4L2Q8NA75 395 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 C3orf20Q8ND61 904 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 OR8D1Q8WZ84 308 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 VCPIP1Q96JH7 1222 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 INSM2Q96T92 566 aaPredicted RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 TBCBQ99426 244 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 OMDQ99983 421 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 NCAPGQ9BPX3 1015 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 C11orf70Q9BRQ4 267 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 FEM1AQ9BSK4 669 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 SELENOOQ9BVL4 669 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 EDEM3Q9BZQ6 932 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 SIK2Q9H0K1 926 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 SMOC1Q9H4F8 434 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 PPARGC1AQ9UBK2 798 aaKnown RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 INTS6Q9UL03 887 aaKnown RBP11.72□□□□□ -0.53
LINC00648-204ENST00000557749 HRH3Q9Y5N1 445 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 DMXL1Q9Y485 3027 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 CEP192Q8TEP8 1941 aa11.72□□□□□ -0.53
LINC00648-204ENST00000557749 IGLV3-10A0A075B6K4 115 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 DRGXA6NNA5 263 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 GOLGA6L19H0YKK7 550 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 TM4SF5O14894 197 aa11.71□□□□□ -0.53
LINC00648-204ENST00000557749 BCAT2O15382 392 aaPredicted RBP11.71□□□□□ -0.53
LINC00648-204ENST00000557749 DFNA5O60443 496 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms