RNA–Protein interactions for RNA: ENST00000557638.1

RALGAPA1-218, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 2

Gene RALGAPA1, Length 586 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-218	ENST00000557638	NUAK2	Q9H093	628 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TMEM184C	Q9NVA4	438 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CLIC5	Q9NZA1	410 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TMOD4	Q9NZQ9	345 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	FAM50B	Q9Y247	325 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	DGKB	Q9Y6T7	804 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	KIAA1551	Q9HCM1	1747 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CACNA1I	Q9P0X4	2223 aa		5.19	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	OR2W5	A6NFC9	320 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	RRH	O14718	337 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TMEM191B	P0C7N4	346 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	MST1	P26927	711 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	PPM1F	P49593	454 aa	Predicted RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CCT4	P50991	539 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	RAE1	P78406	368 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	NUCB1	Q02818	461 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ZNF91	Q05481	1191 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	GPS1	Q13098	491 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	KPNB1	Q14974	876 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	FAM110C	Q1W6H9	321 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TUBB8	Q3ZCM7	444 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	SLC9C1	Q4G0N8	1177 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	FAXC	Q5TGI0	409 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CCDC30	Q5VVM6	783 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	FAM90A2P	Q658T7	463 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	BEND5	Q7L4P6	421 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	IRF2BP2	Q7Z5L9	587 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ITPRIP	Q8IWB1	547 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	SUGP1	Q8IWZ8	645 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CLASRP	Q8N2M8	674 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ANKRD44	Q8N8A2	993 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CCDC89	Q8N998	374 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	PARD3B	Q8TEW8	1205 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	SNRNP27	Q8WVK2	155 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	SKA1	Q96BD8	255 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	VCPIP1	Q96JH7	1222 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	SERINC2	Q96SA4	455 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	NAA15	Q9BXJ9	866 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	RNF26	Q9BY78	433 aa	Predicted RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	MAGEB5	Q9BZ81	275 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CHMP4B	Q9H444	224 aa	Known RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	RWDD1	Q9H446	243 aa	Predicted RBP	5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TMEM8A	Q9HCN3	771 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	NLRC4	Q9NPP4	1024 aa		5.18	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	BRCA2	P51587	3418 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	DYTN	A2CJ06	578 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	C16orf96	A6NNT2	1141 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	KRTAP29-1	A8MX34	341 aa	Predicted RBP	5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ERVV-2	B6SEH9	535 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CCNT2	O60583	730 aa	Known RBP	5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	NTN1	O95631	604 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	HSP90AB1	P08238	724 aa	Known RBP	5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	DUSP1	P28562	367 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	PRIM2	P49643	509 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	PUM3	Q15397	648 aa	Known RBP	5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	LONRF1	Q17RB8	773 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TRIM71	Q2Q1W2	868 aa	Known RBP	5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TLDC1	Q6P9B6	456 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ZNF790	Q6PG37	636 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	C1orf228	Q6PIY5	440 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ZNF354C	Q86Y25	554 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CCDC28A	Q8IWP9	274 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CCDC33	Q8N5R6	958 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	WIPF2	Q8TF74	440 aa	Predicted RBP	5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	GDF15	Q99988	308 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	DCTPP1	Q9H773	170 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	AGO4	Q9HCK5	861 aa	Known RBP	5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ABHD10	Q9NUJ1	306 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	FNIP2	Q9P278	1114 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	POLG2	Q9UHN1	485 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	BTAF1	O14981	1849 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ZNF831	Q5JPB2	1677 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	UTY	O14607	1347 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	PCDH11X	Q9BZA7	1347 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	PCDH11Y	Q9BZA8	1340 aa		5.17	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ARFGEF2	Q9Y6D5	1785 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	INPPL1	O15357	1258 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TOMM70	O94826	608 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	SETSIP	P0DME0	302 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	HSPA1A	P0DMV8	641 aa	Known RBP	5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	HSPA1B	P0DMV9	641 aa	Known RBP	5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	GABRB3	P28472	473 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	STT3A	P46977	705 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TM4SF4	P48230	202 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TEF	Q10587	303 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	MTX1	Q13505	466 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	STIM1	Q13586	685 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ZNF260	Q3ZCT1	412 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	EARS2	Q5JPH6	523 aa	Known RBP	5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	C1orf141	Q5JVX7	400 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	BEND3	Q5T5X7	828 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	PDXDC1	Q6P996	788 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	C16orf54	Q6UWD8	224 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	RINL	Q6ZS11	566 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	TFAP2D	Q7Z6R9	452 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	SRL	Q86TD4	932 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	ANKRD13B	Q86YJ7	626 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	RPAP2	Q8IXW5	612 aa	Predicted RBP	5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	CCDC150	Q8NCX0	1101 aa		5.16	□□□□□ -1.58
RALGAPA1-218	ENST00000557638	BCAS4	Q8TDM0	211 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms