RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 FZD2Q14332 565 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 DLG2Q15700 870 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 ZCWPW2Q504Y3 356 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 HS1BP3Q53T59 392 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 PERM1Q5SV97 790 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 FAM46CQ5VWP2 391 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 RNF219Q5W0B1 726 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 RAP1GAP2Q684P5 730 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 CXorf57Q6NSI4 855 aaKnown RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 NEK5Q6P3R8 708 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 ARRDC3Q96B67 414 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 CCDC97Q96F63 343 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 CCNL2Q96S94 520 aaPredicted RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 PRMT1Q99873 361 aaKnown RBP12.91□□□□□ -0.34
PSEN1-221ENST00000557293 CALN1Q9BXU9 219 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 FAM117AQ9C073 453 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 CEP83Q9Y592 693 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 OR51B4Q9Y5P0 310 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 RP1P56715 2156 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 COL12A1Q99715 3063 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 AHCTF1Q8WYP5 2266 aa12.91□□□□□ -0.34
PSEN1-221ENST00000557293 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CPED1A4D0V7 1026 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 NEMP2A6NFY4 417 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 MOCS2O96007 188 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CALCAP01258 141 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 ALPPL2P10696 532 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 NNMTP40261 264 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 SULT2A1Q06520 285 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 ZNF177Q13360 481 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CUL2Q13617 745 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 FGL2Q14314 439 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 DRAP1Q14919 205 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CNGA2Q16280 664 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CDKN3Q16667 212 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 ZSCAN23Q3MJ62 389 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CBWD6Q4V339 395 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 ZC3H12AQ5D1E8 599 aaKnown RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CBWD3Q5JTY5 395 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CBWD5Q5RIA9 395 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 TPRG1LQ5T0D9 272 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 XKR5Q6UX68 686 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 Q6ZSR6 202 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 Q6ZVU0 165 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 EFL1Q7Z2Z2 1120 aaKnown RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 HORMAD1Q86X24 394 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CIR1Q86X95 450 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CCDC117Q8IWD4 279 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CCAR2Q8N163 923 aaKnown RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 ERCC4Q92889 916 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 INTS4Q96HW7 963 aaKnown RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 DUSP23Q9BVJ7 150 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 KIAA1257Q9ULG3 409 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 ATXN7L1Q9ULK2 861 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 MAPK8IP1Q9UQF2 711 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 HEMK1Q9Y5R4 338 aaPredicted RBP12.9□□□□□ -0.34
PSEN1-221ENST00000557293 HS3ST3A1Q9Y663 406 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 CSNK1G3Q9Y6M4 447 aa12.9□□□□□ -0.34
PSEN1-221ENST00000557293 TYW5A2RUC4 315 aaKnown RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 POM121BA6NF01 834 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 ALOX15BO15296 676 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 TNFSF15O95150 251 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 CSF2P04141 144 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 NEFLP07196 543 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 HNRNPA2B1P22626 353 aaKnown RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 MLLT3P42568 568 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 RPL34P49207 117 aaKnown RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 MXI1P50539 228 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 IRAK1P51617 712 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 HNRNPKP61978 463 aaKnown RBP eCLIP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 PITX1P78337 314 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 TGIF1Q15583 401 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 TMEM259Q4ZIN3 620 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 ERICH6BQ5W0A0 696 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 SEL1L3Q68CR1 1132 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 OR6B2Q6IFH4 312 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 ZCCHC8Q6NZY4 707 aaKnown RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 CRTC1Q6UUV9 634 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 ATG14Q6ZNE5 492 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 DSG4Q86SJ6 1040 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 TAC4Q86UU9 113 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 ZNF548Q8NEK5 533 aaPredicted RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 WDR36Q8NI36 951 aaKnown RBP12.89□□□□□ -0.35
PSEN1-221ENST00000557293 EXTL1Q92935 676 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 HSFY1Q96LI6 401 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 SERPINB11Q96P15 392 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 SEMA3CQ99985 751 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 MIS12Q9H081 205 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 FOXD4L1Q9NU39 408 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 DNAJC28Q9NX36 388 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 FAM13BQ9NYF5 915 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 ANKMY1Q9P2S6 941 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 SALL4Q9UJQ4 1053 aa12.89□□□□□ -0.35
PSEN1-221ENST00000557293 SPTY2D1-AS1A0A0U1RR47 76 aa12.88□□□□□ -0.35
PSEN1-221ENST00000557293 RAD51BO15315 384 aa12.88□□□□□ -0.35
PSEN1-221ENST00000557293 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
PSEN1-221ENST00000557293 MT-CO1P00395 513 aa12.88□□□□□ -0.35
PSEN1-221ENST00000557293 IGLV3-25P01717 112 aa12.88□□□□□ -0.35
PSEN1-221ENST00000557293 AFPP02771 609 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms