RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 CPXM2Q8N436 756 aa12.52□□□□□ -0.41
ABCD4-226ENST00000556971 CHDHQ8NE62 594 aaPredicted RBP12.52□□□□□ -0.41
ABCD4-226ENST00000556971 PCDH19Q8TAB3 1148 aa12.52□□□□□ -0.41
ABCD4-226ENST00000556971 NTPCRQ9BSD7 190 aaKnown RBP12.52□□□□□ -0.41
ABCD4-226ENST00000556971 DDA1Q9BW61 102 aa12.52□□□□□ -0.41
ABCD4-226ENST00000556971 C17orf75Q9HAS0 396 aa12.52□□□□□ -0.41
ABCD4-226ENST00000556971 IPO11Q9UI26 975 aaKnown RBP12.52□□□□□ -0.41
ABCD4-226ENST00000556971 PCDHB3Q9Y5E6 796 aa12.52□□□□□ -0.41
ABCD4-226ENST00000556971 MXRA5Q9NR99 2828 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 EDDM13A0A1B0GTR0 161 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 POM121BA6NF01 834 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 KCNN4O15554 427 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 GSPT1P15170 499 aaKnown RBP12.51□□□□□ -0.41
ABCD4-226ENST00000556971 WARSP23381 471 aaKnown RBP12.51□□□□□ -0.41
ABCD4-226ENST00000556971 F8A1P23610 371 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 SMTNP53814 917 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 TLE4Q04727 773 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 CNTN1Q12860 1018 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 EIF2B5Q13144 721 aaKnown RBP12.51□□□□□ -0.41
ABCD4-226ENST00000556971 PDE1CQ14123 709 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-226ENST00000556971 ZNF630Q2M218 657 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-226ENST00000556971 RINT1Q6NUQ1 792 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 SLC39A4Q6P5W5 647 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 KYAT3Q6YP21 454 aaKnown RBP12.51□□□□□ -0.41
ABCD4-226ENST00000556971 BNC2Q6ZN30 1099 aaPredicted RBP12.51□□□□□ -0.41
ABCD4-226ENST00000556971 CSGALNACT2Q8N6G5 542 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 ERMNQ8TAM6 284 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 PNPLA2Q96AD5 504 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 CENPTQ96BT3 561 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 MRGPRX3Q96LB0 322 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 BMFQ96LC9 184 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 CLPBQ9H078 707 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 NMUR1Q9HB89 426 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 RDH14Q9HBH5 336 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 SLC39A1Q9NY26 324 aa12.51□□□□□ -0.41
ABCD4-226ENST00000556971 VWA3AA6NCI4 1184 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 SPINT1O43278 529 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 PLS3P13797 630 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 TAS2R38P59533 333 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 CCT2P78371 535 aaKnown RBP12.5□□□□□ -0.41
ABCD4-226ENST00000556971 ABHD18Q0P651 414 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 MPPE1Q53F39 396 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 CPZQ66K79 652 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 ANKS6Q68DC2 871 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 APLFQ8IW19 511 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-226ENST00000556971 NRSN1Q8IZ57 195 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 CCDC112Q8NEF3 446 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 CXorf38Q8TB03 319 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 CGRRF1Q99675 332 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 DCLK3Q9C098 648 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
ABCD4-226ENST00000556971 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 DMAP1Q9NPF5 467 aaPredicted RBP12.5□□□□□ -0.41
ABCD4-226ENST00000556971 RASAL2Q9UJF2 1139 aa12.5□□□□□ -0.41
ABCD4-226ENST00000556971 TRPM6Q9BX84 2022 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 A0A1W2PQH9 124 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 DPM1O60762 260 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 DEXIO95424 95 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 PLA2G4BP0C869 781 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 FOSL1P15407 271 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 TSHRP16473 764 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 CCT6AP40227 531 aaKnown RBP12.49□□□□□ -0.41
ABCD4-226ENST00000556971 CHAF1BQ13112 559 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 SEMA5AQ13591 1074 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 ARID5BQ14865 1188 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 KLHDC10Q6PID8 442 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 LIMS2Q7Z4I7 341 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 SPRED1Q7Z699 444 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 BIVMQ86UB2 503 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 FAM35AQ86V20 835 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 HORMAD1Q86X24 394 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 PHACTR4Q8IZ21 702 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 IQCKQ8N0W5 287 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
ABCD4-226ENST00000556971 CHTF18Q8WVB6 975 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 BTN2A2Q8WVV5 523 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 ITLN2Q8WWU7 325 aaPredicted RBP12.49□□□□□ -0.41
ABCD4-226ENST00000556971 BRF1Q92994 677 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 ARSGQ96EG1 525 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 C14orf79Q96F83 325 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 MRPL45Q9BRJ2 306 aaKnown RBP12.49□□□□□ -0.41
ABCD4-226ENST00000556971 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
ABCD4-226ENST00000556971 MCCC2Q9HCC0 563 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.49□□□□□ -0.41
ABCD4-226ENST00000556971 SIX4Q9UIU6 781 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 DOLKQ9UPQ8 538 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 KIAA1024Q9UPX6 916 aa12.49□□□□□ -0.41
ABCD4-226ENST00000556971 PCDHGA9Q9Y5G4 932 aaKnown RBP12.49□□□□□ -0.41
ABCD4-226ENST00000556971 TISP43B9A030 160 aa12.48□□□□□ -0.41
ABCD4-226ENST00000556971 HGSO14964 777 aaPredicted RBP12.48□□□□□ -0.41
ABCD4-226ENST00000556971 INPP4BO15327 924 aa12.48□□□□□ -0.41
ABCD4-226ENST00000556971 PIGRP01833 764 aa12.48□□□□□ -0.41
ABCD4-226ENST00000556971 HNRNPH3P31942 346 aaKnown RBP12.48□□□□□ -0.41
ABCD4-226ENST00000556971 CSKP41240 450 aa12.48□□□□□ -0.41
ABCD4-226ENST00000556971 CTSOP43234 321 aaPredicted RBP12.48□□□□□ -0.41
ABCD4-226ENST00000556971 SGSHP51688 502 aa12.48□□□□□ -0.41
ABCD4-226ENST00000556971 ELAVL3Q14576 367 aaKnown RBP12.48□□□□□ -0.41
ABCD4-226ENST00000556971 ADCK5Q3MIX3 580 aa12.48□□□□□ -0.41
ABCD4-226ENST00000556971 SEL1L3Q68CR1 1132 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms