RNA–Protein interactions for RNA: ENST00000556622.1

CPSF2-205, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 5

Gene CPSF2, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-205ENST00000556622 PALB2Q86YC2 1186 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SRRM1Q8IYB3 904 aaKnown RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 OXR1Q8N573 874 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF513Q8N8E2 541 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 KCTD6Q8NC69 237 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 PPFIBP2Q8ND30 876 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 IL31RAQ8NI17 732 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 MDM1Q8TC05 714 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 MYLIPQ8WY64 445 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SPATA33Q96N06 139 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SLITRK1Q96PX8 696 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 TBCBQ99426 244 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 C11orf70Q9BRQ4 267 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 NAT9Q9BTE0 207 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SEZ6LQ9BYH1 1024 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 TRIM55Q9BYV6 548 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 KLC2Q9H0B6 622 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 EPB41L4BQ9H329 900 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 TRABDQ9H4I3 376 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 NOD2Q9HC29 1040 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SAYSD1Q9NPB0 183 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 PRMT7Q9NVM4 692 aaPredicted RBP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.32□□□□□ -1.4
CPSF2-205ENST00000556622 PAK5Q9P286 719 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 SUSD2Q9UGT4 822 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 BRCA2P51587 3418 aa6.32□□□□□ -1.4
CPSF2-205ENST00000556622 TNRC18O15417 2968 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 LRRD1A4D1F6 860 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 TRIM43BA6NCK2 446 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 A8MXQ7 604 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ANKRD65E5RJM6 399 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 APOC4-APOC2K7ER74 178 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ACKR2O00590 384 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 KLF11O14901 512 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 CHADO15335 359 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ATP9AO75110 1047 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 FAM155BO75949 473 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 OAS1P00973 400 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 APOC2P02655 101 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 MT-ND3P03897 115 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 INHBAP08476 426 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 VDRP11473 427 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 RAC2P15153 192 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ACO1P21399 889 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 TGM2P21980 687 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 PSMA2P25787 234 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 IVDP26440 423 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ELF1P32519 619 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 NR2C2P49116 596 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF132P52740 706 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF143P52747 638 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ERVFC1P60507 584 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 CDK16Q00536 496 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 PURAQ00577 322 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ARHGAP1Q07960 439 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 NAB1Q13506 487 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF699Q32M78 642 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 CMPK2Q5EBM0 449 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 STXBP5Q5T5C0 1151 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 TDRD10Q5VZ19 366 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 PLA2G4FQ68DD2 849 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 DBX2Q6ZNG2 339 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 TSHZ1Q6ZSZ6 1077 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 CYS1Q717R9 158 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ANKRD33Q7Z3H0 272 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 TBC1D1Q86TI0 1168 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ZBED8Q8IZ13 594 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ANKRD42Q8N9B4 389 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ABHD4Q8TB40 342 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 CDKL2Q92772 493 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 KAT2BQ92831 832 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 BADQ92934 168 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 TRIM43Q96BQ3 446 aaPredicted RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 RCC1LQ96I51 464 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 GDF15Q99988 308 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 PAIP2Q9BPZ3 127 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ADPGKQ9BRR6 497 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 KLHL25Q9H0H3 589 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 LRMDAQ9H2I8 198 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ADAM7Q9H2U9 754 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 VCXQ9H320 206 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 VCX3BQ9H321 246 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 SMARCAD1Q9H4L7 1026 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 STN1Q9H668 368 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 DCLRE1BQ9H816 532 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 RPF1Q9H9Y2 349 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 EBF2Q9HAK2 575 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 POLD4Q9HCU8 107 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 GPRC5CQ9NQ84 441 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 CISHQ9NSE2 258 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 PRKAG3Q9UGI9 489 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 BCAP29Q9UHQ4 241 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 LNPEPQ9UIQ6 1025 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 ZNF180Q9UJW8 692 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 PHTF1Q9UMS5 762 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.31□□□□□ -1.4
CPSF2-205ENST00000556622 LCTP09848 1927 aa6.31□□□□□ -1.4
CPSF2-205ENST00000556622 FRMPD3Q5JV73 1810 aa6.3□□□□□ -1.4
CPSF2-205ENST00000556622 hCG_1818297A0A087WSY0 165 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms