RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 EBF2Q9HAK2 575 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 OSGEPQ9NPF4 335 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 AASDHPPTQ9NRN7 309 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 SERGEFQ9UGK8 458 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 MAPK8IP1Q9UQF2 711 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 PCDHB1Q9Y5F3 818 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 ATP6V1DQ9Y5K8 247 aa10.4□□□□□ -0.74
SCFD1-220ENST00000556486 BOD1L1Q8NFC6 3051 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 ZNF202O95125 648 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 IGHV4-34P06331 123 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 SETSIPP0DME0 302 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 EPB41P11171 864 aaKnown RBP10.39□□□□□ -0.75
SCFD1-220ENST00000556486 EPB42P16452 691 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 GLDCP23378 1020 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 RPS14P62263 151 aaKnown RBP10.39□□□□□ -0.75
SCFD1-220ENST00000556486 ZBTB16Q05516 673 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 BST2Q10589 180 aaKnown RBP10.39□□□□□ -0.75
SCFD1-220ENST00000556486 CUL2Q13617 745 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 RTP5Q14D33 572 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 CBWD6Q4V339 395 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 MPPE1Q53F39 396 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 CBWD3Q5JTY5 395 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 CBWD5Q5RIA9 395 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 MSANTD2Q6P1R3 559 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 RSRC2Q7L4I2 434 aaKnown RBP10.39□□□□□ -0.75
SCFD1-220ENST00000556486 JAZF1Q86VZ6 243 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 UBR7Q8N806 425 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 SAP25Q8TEE9 199 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 WFIKKN2Q8TEU8 576 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 PMEPA1Q969W9 287 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 CCDC34Q96HJ3 373 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 ELF4Q99607 663 aaPredicted RBP10.39□□□□□ -0.75
SCFD1-220ENST00000556486 ULBP1Q9BZM6 244 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 NRSN2Q9GZP1 204 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 GOLPH3LQ9H4A5 285 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 CAAP1Q9H8G2 361 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 CNGB3Q9NQW8 809 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 TSPAN16Q9UKR8 245 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 KIAA1257Q9ULG3 409 aa10.39□□□□□ -0.75
SCFD1-220ENST00000556486 SLC12A8A0AV02 714 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 O00370 1275 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 SDC3O75056 442 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 IGLV3-27P01718 113 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 DNTTP04053 509 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 MPOP05164 745 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 GRNP28799 593 aaKnown RBP10.38□□□□□ -0.75
SCFD1-220ENST00000556486 HLA-FP30511 346 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 ACTN2P35609 894 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 HARS2P49590 506 aaKnown RBP10.38□□□□□ -0.75
SCFD1-220ENST00000556486 YWHAEP62258 255 aaKnown RBP10.38□□□□□ -0.75
SCFD1-220ENST00000556486 FKBP3Q00688 224 aaKnown RBP10.38□□□□□ -0.75
SCFD1-220ENST00000556486 LRRC63Q05C16 580 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 PWP1Q13610 501 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 TBC1D25Q3MII6 688 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 SGO2Q562F6 1265 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 ADGRF1Q5T601 910 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 KIAA1614Q5VZ46 1190 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 BSPRYQ5W0U4 402 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 RELL1Q8IUW5 271 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 ZNF557Q8N988 423 aaPredicted RBP10.38□□□□□ -0.75
SCFD1-220ENST00000556486 SLC35C1Q96A29 364 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 AZIN2Q96A70 460 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 MRFAP1L1Q96HT8 127 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 GSDMAQ96QA5 445 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 GTPBP4Q9BZE4 634 aaKnown RBP10.38□□□□□ -0.75
SCFD1-220ENST00000556486 MMRN2Q9H8L6 949 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 PRSS16Q9NQE7 514 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 ABCC13Q9NSE7 274 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 RMND1Q9NWS8 449 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 ADAMTS1Q9UHI8 967 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 PCDHGA1Q9Y5H4 931 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 COL6A6A6NMZ7 2263 aa10.38□□□□□ -0.75
SCFD1-220ENST00000556486 YJEFN3A6XGL0 299 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 C10orf142B7Z368 130 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 B8ZZF3 427 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 E7ENQ6 273 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 TULP2O00295 520 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 IRAK2O43187 625 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 SPINT1O43278 529 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 PAEPP09466 180 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 VDRP11473 427 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 TBXAS1P24557 533 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-220ENST00000556486 EPHA8P29322 1005 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-220ENST00000556486 PRCPP42785 496 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 NUMBP49757 651 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 INSM1Q01101 510 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-220ENST00000556486 ADIGQ0VDE8 80 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 POU4F2Q12837 409 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 TCEAL1Q15170 157 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 GOLGA7BQ2TAP0 167 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 ARSJQ5FYB0 599 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-220ENST00000556486 ZNF658Q5TYW1 1059 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-220ENST00000556486 KIAA0895LQ68EN5 471 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 NCEH1Q6PIU2 408 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 FOXR2Q6PJQ5 311 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 LCLAT1Q6UWP7 414 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 CHST9Q7L1S5 443 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 ADIPOR2Q86V24 386 aa10.37□□□□□ -0.75
SCFD1-220ENST00000556486 SMYD4Q8IYR2 804 aaPredicted RBP10.37□□□□□ -0.75
SCFD1-220ENST00000556486 FMR1NBQ8N0W7 255 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms