RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 ZNF534Q76KX8 674 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 PDCD7Q8N8D1 485 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 MCUQ8NE86 351 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TTC16Q8NEE8 873 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 OR2W6PQ8NHA6 318 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SH3RF2Q8TEC5 729 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SMG7Q92540 1137 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 TMA16Q96EY4 203 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 C9orf72Q96LT7 481 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SERPINB12Q96P63 405 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 CDCA3Q99618 268 aaPredicted RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 WDR83Q9BRX9 315 aaKnown RBP11.07□□□□□ -0.64
LINC01550-206ENST00000556462 MAGEH1Q9H213 219 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 GBA3Q9H227 469 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SAYSD1Q9NPB0 183 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 NINJ2Q9NZG7 142 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 ZNF510Q9Y2H8 683 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 SH3BP1Q9Y3L3 701 aa11.07□□□□□ -0.64
LINC01550-206ENST00000556462 NYNRINQ9P2P1 1898 aaKnown RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 ZNF197O14709 1029 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 AVILO75366 819 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 NUDT17P0C025 328 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 GRIA1P42261 906 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 MAGEA3P43357 314 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 CDK16Q00536 496 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 GNA12Q03113 381 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 HNRNPDQ14103 355 aaKnown RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 CBX2Q14781 532 aaPredicted RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 HP1BP3Q5SSJ5 553 aaPredicted RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 TTC39BQ5VTQ0 682 aaPredicted RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 CXorf57Q6NSI4 855 aaKnown RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 CEP128Q6ZU80 1094 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 SETD3Q86TU7 594 aaPredicted RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 PDIK1LQ8N165 341 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 AGGF1Q8N302 714 aaeCLIP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 CPXM2Q8N436 756 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 ITFG1Q8TB96 612 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 USP33Q8TEY7 942 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 PIDD1Q9HB75 910 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 TDP1Q9NUW8 608 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 SHROOM3Q8TF72 1996 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 SPTBN5Q9NRC6 3674 aaKnown RBP11.06□□□□□ -0.64
LINC01550-206ENST00000556462 C5orf42Q9H799 3197 aa11.06□□□□□ -0.64
LINC01550-206ENST00000556462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 E2F8A0AVK6 867 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ILVBLA1L0T0 632 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 E7EVH7 732 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 EIF3HO15372 352 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 TBL1XO60907 577 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 PRAMEF12O95522 483 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 GLP2RO95838 553 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 SHBGP04278 402 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 CEBPBP17676 345 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 NFKB1P19838 968 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 HOXD9P28356 352 aaPredicted RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 FAM193AP78312 1265 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 IL10RBQ08334 325 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 SLC10A7Q0GE19 358 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ZNF177Q13360 481 aaPredicted RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 FSCBQ5H9T9 825 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 C6orf118Q5T5N4 469 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 KCTD11Q693B1 232 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 LRIG3Q6UXM1 1119 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 TMEM184AQ6ZMB5 413 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 OTOP3Q7RTS5 596 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 KLHDC8BQ8IXV7 354 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ZBED8Q8IZ13 594 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 TEX26Q8N6G2 289 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 OR7D4Q8NG98 312 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ING5Q8WYH8 240 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 SH3GL2Q99962 352 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 FRMD8Q9BZ67 464 aaPredicted RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ACBD3Q9H3P7 528 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 IGFLR1Q9H665 355 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 SFXN1Q9H9B4 322 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 PDFQ9HBH1 243 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 LRRC4CQ9HCJ2 640 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 EIF2B3Q9NR50 452 aaKnown RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 RBM22Q9NW64 420 aaKnown RBP eCLIP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 RSPH14Q9UHP6 348 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ZMYM5Q9UJ78 669 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 MRPS23Q9Y3D9 190 aaKnown RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 H3BQF6 201 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 PRAMEF11O60813 436 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ACSL3O95573 720 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 HLA-DQB2P05538 268 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 NUMBP49757 651 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 RENBPP51606 427 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 TNK2Q07912 1038 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ZNF844Q08AG5 666 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 HYAL1Q12794 435 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ANO4Q32M45 955 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 DENND2CQ68D51 928 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ITPRIPL1Q6GPH6 555 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 PPP1R21Q6ZMI0 780 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 IGDCC3Q8IVU1 814 aa11.05□□□□□ -0.64
LINC01550-206ENST00000556462 ARID3BQ8IVW6 561 aaPredicted RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 TDRD5Q8NAT2 981 aaKnown RBP11.05□□□□□ -0.64
LINC01550-206ENST00000556462 HJURPQ8NCD3 748 aaPredicted RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms