RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 DNAJB3Q8WWF6 145 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF317Q96PQ6 595 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 WDR83Q9BRX9 315 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 NT5C1AQ9BXI3 368 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PPANQ9NQ55 473 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RPRD1BQ9NQG5 326 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 TSR3Q9UJK0 312 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ANAPC5Q9UJX4 755 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CLEC4AQ9UMR7 237 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 USP18Q9UMW8 372 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 DRG1Q9Y295 367 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 DERAQ9Y315 318 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CBY1Q9Y3M2 126 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SNX9Q9Y5X1 595 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GOLGA8QA0A0J9YX86 632 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RRN3P2A6NIE6 340 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 E7EVH7 732 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 TRDMT1O14717 391 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RGS16O15492 202 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CST8O60676 142 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GRAP2O75791 330 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 FSBPO95073 299 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 TRUB2O95900 331 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 AGTP01019 485 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GLAP06280 429 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CHN1P15882 459 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 IGFBP6P24592 240 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF143P52747 638 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 DYNLT1P63172 113 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 BLMHQ13867 455 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 MFSD10Q14728 455 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SNX17Q15036 470 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 XKR4Q5GH76 650 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 FAM182AQ5T1J6 154 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF618Q5T7W0 954 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 C7orf31Q8N865 590 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ANKRD53Q8N9V6 530 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ARRDC4Q8NCT1 418 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SLC35F5Q8WV83 523 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 HDAC2Q92769 488 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 INTS12Q96CB8 462 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 C9orf72Q96LT7 481 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 TDRD1Q9BXT4 1180 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RRAGCQ9HB90 399 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GOLGA2P5Q9HBQ8 144 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 DUSP12Q9UNI6 340 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PTPRDP23468 1912 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 A0A0G2JPF8 293 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 C5orf60A6NFR6 353 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 HNRNPCL3B7ZW38 293 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PIRO00625 290 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 BIRC5O15392 142 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PAPSS1O43252 624 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PDE5AO76074 875 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 KLHL2O95198 593 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 LTA4HP09960 611 aaKnown RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 HNRNPCL4P0DMR1 293 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 FGFR1P11362 822 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 P4HA1P13674 534 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 NDUFV2P19404 249 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 TFE3P19532 575 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CYP4F8P98187 520 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PLOD1Q02809 727 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 MMRN1Q13201 1228 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GOLGA7BQ2TAP0 167 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 FSCBQ5H9T9 825 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 C9orf57Q5W0N0 161 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SIGIRRQ6IA17 410 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 NOTUMQ6P988 496 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 IYDQ6PHW0 289 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 VSTM1Q6UX27 236 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 LIMS2Q7Z4I7 341 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ACOT1Q86TX2 421 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RASAL3Q86YV0 1011 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CCNYL1Q8N7R7 359 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 MAGEC3Q8TD91 643 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 CCT6BQ92526 530 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PRCCQ92733 491 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RMDN1Q96DB5 314 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ZNF845Q96IR2 970 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 RBM15Q96T37 977 aaKnown RBP eCLIP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SLC4A5Q9BY07 1137 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 B3GNT5Q9BYG0 378 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 GCOM2Q9BZD3 368 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ROPN1BQ9BZX4 212 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ROPN1Q9HAT0 212 aaPredicted RBP5.2□□□□□ -1.58
TMEM260-210ENST00000556422 PCDH9Q9HC56 1237 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 ATP13A1Q9HD20 1204 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SDHAF3Q9NRP4 125 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 FAM49BQ9NUQ9 324 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SIRT5Q9NXA8 310 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SAGE1Q9NXZ1 904 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 INPP5FQ9Y2H2 1132 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 STON1Q9Y6Q2 735 aa5.2□□□□□ -1.58
TMEM260-210ENST00000556422 SMIM28A0A1B0GU29 152 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 MYADML2A6NDP7 307 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 TMEM88BA6NKF7 163 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 IFNA14P01570 189 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 ATP6V1B1P15313 513 aa5.19□□□□□ -1.58
TMEM260-210ENST00000556422 LMO2P25791 158 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms