RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 TXNRD3NBQ6F5E7 133 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 ANO7Q6IWH7 933 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 ZC3H14Q6PJT7 736 aaKnown RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 TFAP2DQ7Z6R9 452 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 TMTC1Q8IUR5 882 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 CCDC117Q8IWD4 279 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 SUMF1Q8NBK3 374 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 SLC35G2Q8TBE7 412 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 ZNF564Q8TBZ8 553 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 FRS2Q8WU20 508 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 CTNNBL1Q8WYA6 563 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 TBC1D31Q96DN5 1066 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 KCTD15Q96SI1 283 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 SNRNP25Q9BV90 132 aaKnown RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 ACE2Q9BYF1 805 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 MKRN2Q9H000 416 aaKnown RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 EPC1Q9H2F5 836 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 NOL6Q9H6R4 1146 aaKnown RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 POLMQ9NP87 494 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 OSGEPQ9NPF4 335 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 GPATCH2LQ9NWQ4 482 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 USP18Q9UMW8 372 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 AP4E1Q9UPM8 1137 aa9.9□□□□□ -0.82
SRP54-210ENST00000556380 EPN1Q9Y6I3 576 aaPredicted RBP9.9□□□□□ -0.82
SRP54-210ENST00000556380 GON4LQ3T8J9 2241 aa9.9□□□□□ -0.83
SRP54-210ENST00000556380 DOCK4Q8N1I0 1966 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 TCRBV21S2A2A0A5A6 115 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 TTC34A8MYJ7 566 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 EIF3CLB5ME19 914 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 ATP9BO43861 1147 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 PRPSAP2O60256 369 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 SNAP91O60641 907 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 MOCS3O95396 460 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 MT-CO1P00395 513 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 RHOCP08134 193 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 RARAP10276 462 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 NDUFV2P19404 249 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 OR1E1P30953 314 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 HTR7P34969 479 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 MAGEA1P43355 309 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 HCAR3P49019 387 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 MAPKAPK2P49137 400 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 NUMBP49757 651 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 STK19P49842 368 aaPredicted RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 ARSEP51690 589 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 COPAP53621 1224 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 GNA12Q03113 381 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 SULT2A1Q06520 285 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 DPYSL2Q16555 572 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 HNRNPA1L2Q32P51 320 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 FNDC3BQ53EP0 1204 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 C9orf64Q5T6V5 341 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 RWDD4Q6NW29 188 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 SERPINA13PQ6UXR4 307 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 RAD9BQ6WBX8 426 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 ZNF366Q8N895 744 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 RTL3Q8N8U3 475 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 OR7D4Q8NG98 312 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 FAM71BQ8TC56 605 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 HMGB4Q8WW32 186 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 GAB3Q8WWW8 586 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 MRGPRX1Q96LB2 322 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 PPP1R9BQ96SB3 815 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 EIF3CQ99613 913 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 KLC2Q9H0B6 622 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 MTG2Q9H4K7 406 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 DHX35Q9H5Z1 703 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 PRSS16Q9NQE7 514 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 SUN2Q9UH99 717 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 VPS51Q9UID3 782 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 HS3ST2Q9Y278 367 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 REXO2Q9Y3B8 237 aaKnown RBP9.89□□□□□ -0.83
SRP54-210ENST00000556380 PCDHA13Q9Y5I0 950 aa9.89□□□□□ -0.83
SRP54-210ENST00000556380 MUC22E2RYF6 1773 aaPredicted RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 TARSL2A2RTX5 802 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 SOWAHDA6NJG2 315 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 DCLK1O15075 740 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 CREB3O43889 395 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 SYNCRIPO60506 623 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 RPP40O75818 363 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 NDUFA10O95299 355 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 CD160O95971 181 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 EPHX1P07099 455 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 JUNDP17535 347 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 DESP17661 470 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 GLDCP23378 1020 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 IL4RP24394 825 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 EPHB2P29323 1055 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 MAN1A1P33908 653 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 ACVRL1P37023 503 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 P2RY2P41231 377 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 HADHBP55084 474 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 TAS2R40P59535 323 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 DPYSQ14117 519 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 STARD3Q14849 445 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 USP39Q53GS9 565 aaKnown RBP9.88□□□□□ -0.83
SRP54-210ENST00000556380 KCNT1Q5JUK3 1230 aa9.88□□□□□ -0.83
SRP54-210ENST00000556380 RFX8Q6ZV50 586 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms