RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 PRELID2Q8N945 189 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 FBXL13Q8NEE6 735 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 MCPH1Q8NEM0 835 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 RDM1Q8NG50 284 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 RAET1EQ8TD07 263 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 MAGEC3Q8TD91 643 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 DIS3LQ8TF46 1054 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 POMGNT1Q8WZA1 660 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 KRT35Q92764 455 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 GLG1Q92896 1179 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 SLCO2A1Q92959 643 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ARHGEF2Q92974 986 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ART4Q93070 314 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 GFM2Q969S9 779 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 CCDC127Q96BQ5 260 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 PAWRQ96IZ0 340 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 RBM41Q96IZ5 413 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 EXOC2Q96KP1 924 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 CFAP57Q96MR6 1250 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 FNBP1Q96RU3 617 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 PRMT1Q99873 361 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 HSD17B14Q9BPX1 270 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ELAC2Q9BQ52 826 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 JPH2Q9BR39 696 aaPredicted RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 C1QTNF1Q9BXJ1 281 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 MRPL4Q9BYD3 311 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 TXLNGYQ9BZA5 131 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 GPR88Q9GZN0 384 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 CDC42EP4Q9H3Q1 356 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ST6GALNAC4Q9H4F1 302 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 TDRD3Q9H7E2 651 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ATP6V0A4Q9HBG4 840 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 VEZTQ9HBM0 779 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ERVK-5Q9HDB9 667 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 KMT5AQ9NQR1 393 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ANKEF1Q9NU02 776 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 TXLNGQ9NUQ3 528 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 MAP3K20Q9NYL2 800 aaKnown RBP4.6□□□□□ -1.67
ATXN3-241ENST00000556374 TAS2R14Q9NYV8 317 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 GRHL1Q9NZI5 618 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 SENP1Q9P0U3 644 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ANAPC5Q9UJX4 755 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 ARL2BPQ9Y2Y0 163 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 TMX2Q9Y320 296 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 CEP83Q9Y592 693 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 MYPNQ86TC9 1320 aa4.6□□□□□ -1.67
ATXN3-241ENST00000556374 TMEM120BA0PK00 339 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 DENND3A2RUS2 1198 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TCP11X1B4DZS4 312 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TCP10L2B9ZVM9 353 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 NPIPB8E9PQR5 432 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 HNRNPDLO14979 420 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 WDR46O15213 610 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 SLC16A4O15374 487 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CLDN3O15551 220 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 KIF1CO43896 1103 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ZBED4O75132 1171 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ATP5HO75947 161 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 LYPLA2O95372 231 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CRTAMO95727 393 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ICAM1P05362 532 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ASNSP08243 561 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TROVE2P10155 538 aaKnown RBP eCLIP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ARP10275 920 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 BRAFP15056 766 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CYP11B1P15538 503 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 DESP17661 470 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TBXAS1P24557 533 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CCND2P30279 289 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ALDH3A1P30838 453 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 PHBP35232 272 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 COPB2P35606 906 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 FNTBP49356 437 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 RARRES1P49788 294 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 LIG4P49917 911 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 RASSF2P50749 326 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 HSD17B4P51659 736 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 KCNQ1P51787 676 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 YWHAEP62258 255 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 FMO1Q01740 532 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 POU5F1Q01860 360 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 GCNT1Q02742 428 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 PPP3CAQ08209 521 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 FOXL1Q12952 345 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 KLF10Q13118 480 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 SERINC3Q13530 473 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 SNX1Q13596 522 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 FHL2Q14192 279 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 RRP1BQ14684 758 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 PCOLCEQ15113 449 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TMED2Q15363 201 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ZKSCAN8Q15776 578 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 LSM12Q3MHD2 195 aaKnown RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CRB2Q5IJ48 1285 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 ARHGEF16Q5VV41 709 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 NUGGCQ68CJ6 796 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 XRRA1Q6P2D8 792 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 TTC27Q6P3X3 843 aa4.59□□□□□ -1.67
ATXN3-241ENST00000556374 CRELD2Q6UXH1 353 aaPredicted RBP4.59□□□□□ -1.67
ATXN3-241ENST00000556374 NECAB2Q7Z6G3 386 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms