RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 MFSD14CQ5VZR4 134 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 SEL1L3Q68CR1 1132 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 CYP2R1Q6VVX0 501 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 DENND6AQ8IWF6 608 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 CDRT15Q96T59 188 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 PAAF1Q9BRP4 392 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 C16orf70Q9BSU1 422 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 LRIG2O94898 1065 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 CCR10P46092 362 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 KRT80Q6KB66 452 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 OSTM1Q86WC4 334 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 TDRPQ86YL5 185 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 SPNS2Q8IVW8 549 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 GPAMQ9HCL2 828 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 PRDM5Q9NQX1 630 aaPredicted RBP15.13■□□□□ 0.01
CUX1-215ENST00000556210 FAM105AQ9NUU6 356 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 MID2Q9UJV3 735 aa15.13■□□□□ 0.01
CUX1-215ENST00000556210 C10orf71Q711Q0 1435 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 PEX1O43933 1283 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 EDNRBP24530 442 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 IGFBP6P24592 240 aaPredicted RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 MRPS22P82650 360 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 LBRQ14739 615 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 FAM83EQ2M2I3 478 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 NOL9Q5SY16 702 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 ARHGAP22Q7Z5H3 698 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 ZDHHC17Q8IUH5 632 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 LRRC52Q8N7C0 313 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 GIPC2Q8TF65 315 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 COLEC11Q9BWP8 271 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 SMPD4Q9NXE4 827 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 BCAP29Q9UHQ4 241 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 ARHGAP26Q9UNA1 814 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 MYH9P35579 1960 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 A8MX80 341 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 ANPEPP15144 967 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 MPSTP25325 297 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 CDH13P55290 713 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 TWF1Q12792 350 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 KCNJ11Q14654 390 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 RAB44Q7Z6P3 723 aaPredicted RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 HPS6Q86YV9 775 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 SH3TC2Q8TF17 1288 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 RPL26L1Q9UNX3 145 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 SLC12A8A0AV02 714 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 AMHP03971 560 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 VAV1P15498 845 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 PTPN7P35236 360 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 LHX1P48742 406 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 CDH17Q12864 832 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 PDE1CQ14123 709 aaPredicted RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 NCBP2-AS2Q69YL0 99 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 RPS27LQ71UM5 84 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 TMC7Q7Z402 723 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 DIS3LQ8TF46 1054 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 KCNK4Q9NYG8 393 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 STX18Q9P2W9 335 aaKnown RBP15.12■□□□□ 0.01
CUX1-215ENST00000556210 CDYLQ9Y232 598 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 PPME1Q9Y570 386 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 MYO7AQ13402 2215 aa15.12■□□□□ 0.01
CUX1-215ENST00000556210 BCLAF3A2AJT9 711 aaKnown RBP15.11■□□□□ 0.01
CUX1-215ENST00000556210 NEMP2A6NFY4 417 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 MPP1Q00013 466 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 LPCAT4Q643R3 524 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 TAPT1Q6NXT6 567 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 TRIML2Q8N7C3 387 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 PPP2R3CQ969Q6 453 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 CNBD2Q96M20 576 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 GCNAQ96QF7 691 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 NAT9Q9BTE0 207 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 HBS1LQ9Y450 684 aaKnown RBP15.11■□□□□ 0.01
CUX1-215ENST00000556210 ABLIM1O14639 778 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 NMBRP28336 390 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 CCDC117Q8IWD4 279 aaPredicted RBP15.11■□□□□ 0.01
CUX1-215ENST00000556210 ULK2Q8IYT8 1036 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 FAM156AQ8NDB6 213 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 SMARCD1Q96GM5 515 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 ACE2Q9BYF1 805 aaPredicted RBP15.11■□□□□ 0.01
CUX1-215ENST00000556210 RHBDL2Q9NX52 303 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 RGS17Q9UGC6 210 aaPredicted RBP15.11■□□□□ 0.01
CUX1-215ENST00000556210 GMNNO75496 209 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 GM2AP17900 193 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 PBX3P40426 434 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 ABCE1P61221 599 aaKnown RBP15.11■□□□□ 0.01
CUX1-215ENST00000556210 MOGSQ13724 837 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 TMEM198Q66K66 360 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 FSTL4Q6MZW2 842 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 TMEM110Q86TL2 294 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 ATAD1Q8NBU5 361 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 FAM50BQ9Y247 325 aa15.11■□□□□ 0.01
CUX1-215ENST00000556210 GON4LQ3T8J9 2241 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 XPO1O14980 1071 aaKnown RBP15.1■□□□□ 0.01
CUX1-215ENST00000556210 TIMM44O43615 452 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 CHRNGP07510 517 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 FGFR3P22607 806 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 GRIA4P48058 902 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 SCNN1BP51168 640 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 FUT11Q495W5 492 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 SCIMPQ6UWF3 145 aa15.1■□□□□ 0.01
CUX1-215ENST00000556210 USP50Q70EL3 339 aaPredicted RBP15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms