RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 ZNF317Q96PQ6 595 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 LGMNQ99538 433 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 EBNA1BP2Q99848 306 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 NAT9Q9BTE0 207 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 TTPALQ9BTX7 342 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 GPR62Q9BZJ7 368 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 NMUR1Q9HB89 426 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 INTS9Q9NV88 658 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 ABI2Q9NYB9 513 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 DONSONQ9NYP3 566 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 COX16Q9P0S2 106 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 PSMC3IPQ9P2W1 217 aaPredicted RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF180Q9UJW8 692 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 TBX21Q9UL17 535 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 SMG5Q9UPR3 1016 aaKnown RBP8.51□□□□□ -1.05
ATXN3-235ENST00000556082 TLR6Q9Y2C9 796 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 MFHAS1Q9Y4C4 1052 aa8.51□□□□□ -1.05
ATXN3-235ENST00000556082 TDRD15B5MCY1 1934 aaKnown RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 A0A1W2PQH9 124 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 TCRBV9S1A1TA0A576 114 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 TMEM120BA0PK00 339 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ERICH4A6NGS2 130 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 SDR42E2A6NKP2 422 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 RASA4BC9J798 803 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 AP3B1O00203 1094 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 NDUFAB1O14561 156 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 PSMD3O43242 534 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 RASA4O43374 803 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CACNG3O60359 315 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 LILRB5O75023 590 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 PAGE1O75459 146 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 SUN1O94901 812 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 C1QAP02745 245 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 OR4Q2P0C623 313 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ZDHHC11BP0C7U3 371 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 BRAFP15056 766 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 PRKCHP24723 683 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CCNCP24863 283 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 YWHAQP27348 245 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 EPHB2P29323 1055 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 GARSP41250 739 aaKnown RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 MSH2P43246 934 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 KPNA1P52294 538 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 TLE2Q04725 743 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 IKBKEQ14164 716 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 FRG1Q14331 258 aaKnown RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 SKIDA1Q1XH10 827 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 HP1BP3Q5SSJ5 553 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 XP32Q5T750 250 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 AFMIDQ63HM1 303 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 STEAP4Q687X5 459 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 TTC19Q6DKK2 380 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 SLC8B1Q6J4K2 584 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CNKSR3Q6P9H4 555 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF534Q76KX8 674 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CTU1Q7Z7A3 348 aaKnown RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ANKMY2Q8IV38 441 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 GPR65Q8IYL9 337 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ZNF567Q8N184 647 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 AGGF1Q8N302 714 aaeCLIP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 COLGALT1Q8NBJ5 622 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ZSCAN18Q8TBC5 510 aaPredicted RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 DENND1AQ8TEH3 1009 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 FBF1Q8TES7 1133 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 SLC44A1Q8WWI5 657 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CASP10Q92851 521 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 RNF34Q969K3 372 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ALKBH8Q96BT7 664 aaKnown RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CHMP6Q96FZ7 201 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 SGSM3Q96HU1 749 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 PPP1R2P1Q96PQ5 205 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 SELENOSQ9BQE4 189 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 TTLL2Q9BWV7 592 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 RETREG1Q9H6L5 497 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CATSPERBQ9H7T0 1116 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 OLA1Q9NTK5 396 aaKnown RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 CTNNAL1Q9UBT7 734 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ZC3H7BQ9UGR2 993 aaKnown RBP8.5□□□□□ -1.05
ATXN3-235ENST00000556082 NEU3Q9UQ49 428 aa8.5□□□□□ -1.05
ATXN3-235ENST00000556082 ABHD14A-ACY1A0A1B0GW23 586 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MTMR11A4FU01 709 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 FAM47DPA6NHR8 397 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TBKBP1A7MCY6 615 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 POC1B-GALNT4F8VUJ3 575 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 EBAG9O00559 213 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 EFCAB14O75071 495 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 BANF1O75531 89 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ALDH1A2O94788 518 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 MAP3K6O95382 1288 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 VNN2O95498 520 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ALBP02768 609 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 DRD4P21917 467 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 IGFBP4P22692 258 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PTPN3P26045 913 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 TUFMP49411 452 aaKnown RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 ALDH7A1P49419 539 aaKnown RBP8.49□□□□□ -1.05
ATXN3-235ENST00000556082 PGFP49763 221 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 GATMP50440 423 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 SEC24CP53992 1094 aa8.49□□□□□ -1.05
ATXN3-235ENST00000556082 RING1Q06587 406 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms