RNA–Protein interactions for RNA: ENST00000555668.5

GPHN-210, Transcript of gephyrin, human

TSL 4

Gene GPHN, Length 550 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GPHN-210	ENST00000555668	POLH	Q9Y253	713 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	STK38L	Q9Y2H1	464 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	MED16	Q9Y2X0	877 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	CAB39	Q9Y376	341 aa	Predicted RBP	4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	UTP11	Q9Y3A2	253 aa	Known RBP	4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	MRPS23	Q9Y3D9	190 aa	Known RBP	4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	ZNF175	Q9Y473	711 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	USP15	Q9Y4E8	981 aa	Predicted RBP	4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	SAR1B	Q9Y6B6	198 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	RIMS2	Q9UQ26	1411 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	KNDC1	Q76NI1	1749 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	ARHGEF28	Q8N1W1	1705 aa	Known RBP	4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	CRYBG1	Q9Y4K1	1723 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	PCDH11X	Q9BZA7	1347 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	PCDH11Y	Q9BZA8	1340 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	GRIN2B	Q13224	1484 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	MRC2	Q9UBG0	1479 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	CC2D2A	Q9P2K1	1620 aa		4.17	□□□□□ -1.74
GPHN-210	ENST00000555668	TAF1L	Q8IZX4	1826 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PREX1	Q8TCU6	1659 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	URB2	Q14146	1524 aa	Known RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	DUOX2	Q9NRD8	1548 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	ADCY9	O60503	1353 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CASKIN1	Q8WXD9	1431 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668		A0A1B0GWJ7	208 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	ZNF233	A6NK53	670 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668		A8MVJ9	347 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PRSS44	E7EML9	344 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	STMND1	H3BQB6	276 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TRIM77	I1YAP6	450 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	hCG_1984214	I3L0E3	225 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TRAFD1	O14545	582 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	VILL	O15195	856 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	SSX5	O60225	188 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	DLX3	O60479	287 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CCDC22	O60826	627 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	NIPSNAP2	O75323	286 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CLN5	O75503	358 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CYP7B1	O75881	506 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	UNC5C	O95185	931 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CCNDBP1	O95273	360 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	EYA4	O95677	639 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PLAT	P00750	562 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	KRT18	P05783	430 aa	Known RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	KRT3	P12035	628 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CKB	P12277	381 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	MYL6B	P14649	208 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PSMA2	P25787	234 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	SOX6	P35712	828 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PPP1R2	P41236	205 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PIP4K2A	P48426	406 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	POLG	P54098	1239 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	AP1S2	P56377	157 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PEX3	P56589	373 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	MYL6	P60660	151 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CSNK2B	P67870	215 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	MYL5	Q02045	173 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	RHAG	Q02094	409 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	ACVR2B	Q13705	512 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	EFTUD2	Q15029	972 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TAF12	Q16514	161 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TBRG1	Q3YBR2	411 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	FAM76B	Q5HYJ3	339 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	KANK2	Q63ZY3	851 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CYP4F22	Q6NT55	531 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PPP1R2P3	Q6NXS1	205 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	KLHDC10	Q6PID8	442 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TEPP	Q6URK8	271 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	USP53	Q70EK8	1073 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	GPR142	Q7Z601	462 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	SLFN11	Q7Z7L1	901 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	GGN	Q86UU5	652 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	DNAAF5	Q86Y56	855 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TBC1D21	Q8IYX1	336 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	RTKN2	Q8IZC4	609 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	IFNL2	Q8IZJ0	200 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CENPS	Q8N2Z9	138 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TCAIM	Q8N3R3	496 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	TC2N	Q8N9U0	490 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	DNAAF3	Q8N9W5	541 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	OR6C4	Q8NGE1	309 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PHOSPHO1	Q8TCT1	267 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	GRK7	Q8WTQ7	553 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	ATXN2L	Q8WWM7	1075 aa	Known RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	PRPF31	Q8WWY3	499 aa	Known RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	GRAMD1A	Q96CP6	724 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	LCOR	Q96JN0	433 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CCDC43	Q96MW1	224 aa	Known RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	ZNF641	Q96N77	438 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	SERPINB12	Q96P63	405 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	ZNF317	Q96PQ6	595 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	RANBP9	Q96S59	729 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	GPR20	Q99678	358 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	WAC	Q9BTA9	647 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	CINP	Q9BW66	212 aa	Predicted RBP	4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	OR2B2	Q9GZK3	357 aa		4.16	□□□□□ -1.74
GPHN-210	ENST00000555668	RBM38	Q9H0Z9	239 aa	Known RBP	4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms