RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 SLC39A13Q96H72 371 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 BMFQ96LC9 184 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 DDX50Q9BQ39 737 aaKnown RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 ZSWIM1Q9BR11 485 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 ARHGAP9Q9BRR9 750 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 IRX2Q9BZI1 471 aaPredicted RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 ZSCAN16Q9H4T2 348 aaPredicted RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 MAGEF1Q9HAY2 307 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 STARD5Q9NSY2 213 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 ANKMY1Q9P2S6 941 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 PCDHA7Q9UN72 937 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 ZFR2Q9UPR6 939 aaKnown RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 TRAF3IP3Q9Y228 551 aa8.62□□□□□ -1.03
NEK9-206ENST00000555537 COL27A1Q8IZC6 1860 aaPredicted RBP8.62□□□□□ -1.03
NEK9-206ENST00000555537 POM121BA6NF01 834 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 RNF225M0QZC1 329 aaPredicted RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 O00370 1275 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 MCF2LO15068 1137 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 MUSKO15146 869 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 MAPK13O15264 365 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 NOBOXO60393 691 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 PCDH8O95206 1070 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 CTSLP07711 333 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 VDRP11473 427 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 AKT2P31751 481 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 PSMC2P35998 433 aaKnown RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 CYP4F2P78329 520 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 LRMPQ12912 555 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 FZD2Q14332 565 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 ZNF574Q6ZN55 896 aaPredicted RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 RBM44Q6ZP01 1051 aaKnown RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 HORMAD1Q86X24 394 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 CHSY1Q86X52 802 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 CEP57L1Q8IYX8 460 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 CCAR2Q8N163 923 aaKnown RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 SCML4Q8N228 414 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 ARL14Q8N4G2 192 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 TTC39CQ8N584 583 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 WDR36Q8NI36 951 aaKnown RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 ZNF396Q96N95 335 aaPredicted RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 DUSP23Q9BVJ7 150 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 SYNDIG1Q9H7V2 258 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 PREBQ9HCU5 417 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 FAM13BQ9NYF5 915 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 TJP2Q9UDY2 1190 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 TLR6Q9Y2C9 796 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 PCDHGA8Q9Y5G5 932 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 NYNRINQ9P2P1 1898 aaKnown RBP8.61□□□□□ -1.03
NEK9-206ENST00000555537 BSNQ9UPA5 3926 aa8.61□□□□□ -1.03
NEK9-206ENST00000555537 EME2A4GXA9 379 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 C1QTNF3-AMACRE9PGA6 284 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 KPNA3O00505 521 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 RAD51BO15315 384 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 ACTN4O43707 911 aaKnown RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 ATP9BO43861 1147 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 GJB6O95452 261 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 YEATS4O95619 227 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 PAK4O96013 591 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 MT-CO1P00395 513 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 PRR29P0C7W0 189 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 SETSIPP0DME0 302 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 HGFP14210 728 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 HNRNPA2B1P22626 353 aaKnown RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 SLC5A2P31639 672 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 GTF2H1P32780 548 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 ME1P48163 572 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 MXI1P50539 228 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 IRAK1P51617 712 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 PDX1P52945 283 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 HNRNPKP61978 463 aaKnown RBP eCLIP8.6□□□□□ -1.03
NEK9-206ENST00000555537 PITX1P78337 314 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 TLE1Q04724 770 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 MAPK8IP2Q13387 824 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 C1orf61Q13536 156 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 CUL2Q13617 745 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 UBAP2LQ14157 1087 aaKnown RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 FGL2Q14314 439 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 CBWD6Q4V339 395 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 CBWD3Q5JTY5 395 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 CBWD5Q5RIA9 395 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 TPRG1LQ5T0D9 272 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 RESP18Q5W5W9 173 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 ZCCHC8Q6NZY4 707 aaKnown RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 LCLAT1Q6UWP7 414 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 PTAR1Q7Z6K3 402 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 ABI3BPQ7Z7G0 1075 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 DSG4Q86SJ6 1040 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 CLEC14AQ86T13 490 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 TAC4Q86UU9 113 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 PTRH1Q86Y79 214 aaKnown RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 JAMLQ86YT9 394 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 ZNF548Q8NEK5 533 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 LMX1AQ8TE12 382 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 IRGQQ8WZA9 623 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 SGF29Q96ES7 293 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 ALG14Q96F25 216 aa8.6□□□□□ -1.03
NEK9-206ENST00000555537 TCEAL2Q9H3H9 227 aaPredicted RBP8.6□□□□□ -1.03
NEK9-206ENST00000555537 USP29Q9HBJ7 922 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms