RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 SPAG16Q8N0X2 631 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 CCDC33Q8N5R6 958 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 ZNF419Q96HQ0 510 aaPredicted RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 ADGRG7Q96K78 797 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 POLDIP3Q9BY77 421 aaKnown RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 OSBPL5Q9H0X9 879 aaPredicted RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 ZNF304Q9HCX3 659 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 PNRC2Q9NPJ4 139 aaKnown RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 DDX21Q9NR30 783 aaKnown RBP eCLIP3.33□□□□□ -1.88
SRP54-207ENST00000555535 OCIAD1Q9NX40 245 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 GOLGA6AQ9NYA3 693 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 RGL1Q9NZL6 768 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 FBXO4Q9UKT5 387 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 UBE2J1Q9Y385 318 aaPredicted RBP3.33□□□□□ -1.88
SRP54-207ENST00000555535 SLC4A4Q9Y6R1 1079 aa3.33□□□□□ -1.88
SRP54-207ENST00000555535 LOC105369274A0A096LPK9 316 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 LOC102723532A0A0G2JNH3 316 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 FAM234BA2RU67 622 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 FAM172BPA6NC97 362 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 FAM72CH0Y354 149 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 APOL1O14791 398 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 NKX2-8O15522 239 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 IGFBP2P18065 325 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 PRIM2P49643 509 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 NUDT6P53370 316 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 FOXL2P58012 376 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 SNTA1Q13424 505 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 MAPKAPK3Q16644 382 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 AAK1Q2M2I8 961 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 FAM72AQ5TYM5 149 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 FAM72DQ6L9T8 149 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 WDR93Q6P2C0 686 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 Q6ZSV7 163 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 FAM72BQ86X60 149 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 OR4N4Q8N0Y3 316 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 SLC25A41Q8N5S1 370 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 KDM1BQ8NB78 822 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 COLEC11Q9BWP8 271 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 DDX24Q9GZR7 859 aaKnown RBP eCLIP3.32□□□□□ -1.881e-6■□□□□ 10.8
SRP54-207ENST00000555535 SFXN1Q9H9B4 322 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 ADAM18Q9Y3Q7 739 aa3.32□□□□□ -1.88
SRP54-207ENST00000555535 SAA2-SAA4A0A096LPE2 208 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 PNMA6EA0A0J9YXQ4 647 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 EXTL3O43909 919 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 CER1O95813 267 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 SLC5A1P13866 664 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 ZNF10P21506 573 aaPredicted RBP3.31□□□□□ -1.88
SRP54-207ENST00000555535 ITGB8P26012 769 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 CDKN1AP38936 164 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 STT3AP46977 705 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 NSUN2Q08J23 767 aaKnown RBP eCLIP3.31□□□□□ -1.88
SRP54-207ENST00000555535 GALNT3Q14435 633 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 GRM4Q14833 912 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 C10orf76Q5T2E6 689 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 GDPD4Q6W3E5 623 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 RASGRP3Q8IV61 690 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 KLHDC8BQ8IXV7 354 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 FAR2Q96K12 515 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 ADAD1Q96M93 576 aaKnown RBP3.31□□□□□ -1.88
SRP54-207ENST00000555535 DCTN5Q9BTE1 182 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 TNFSF13BQ9Y275 285 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 DTNAQ9Y4J8 743 aa3.31□□□□□ -1.88
SRP54-207ENST00000555535 TRBV5-7A0A0A0MS05 114 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 MAGEA13PA6NCF6 341 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 KCNJ18B7U540 433 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 PCDH17O14917 1159 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 MSI1O43347 362 aaKnown RBP3.3□□□□□ -1.88
SRP54-207ENST00000555535 IDEP14735 1019 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 TNFSF8P32971 234 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 SLC16A2P36021 539 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 TAS2R50P59544 299 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 RPL15P61313 204 aaKnown RBP3.3□□□□□ -1.88
SRP54-207ENST00000555535 TRAF3Q13114 568 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 CSHL1Q14406 222 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 ACCSLQ4AC99 568 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 ANKRD40Q6AI12 368 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
SRP54-207ENST00000555535 FRMD8Q9BZ67 464 aaPredicted RBP3.3□□□□□ -1.88
SRP54-207ENST00000555535 EPS8L2Q9H6S3 715 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 TCEAL9Q9UHQ7 104 aa3.3□□□□□ -1.88
SRP54-207ENST00000555535 EYA2O00167 538 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 HARSP12081 509 aaKnown RBP3.29□□□□□ -1.88
SRP54-207ENST00000555535 DGKAP23743 735 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 FAM3BP58499 235 aaPredicted RBP3.29□□□□□ -1.88
SRP54-207ENST00000555535 RBM6P78332 1123 aaKnown RBP3.29□□□□□ -1.88
SRP54-207ENST00000555535 ZBTB16Q05516 673 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 ST3GAL1Q11201 340 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 HDAC1Q13547 482 aaPredicted RBP3.29□□□□□ -1.88
SRP54-207ENST00000555535 PMS2P11Q13670 270 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 HNF4GQ14541 408 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 RBBP5Q15291 538 aaKnown RBP3.29□□□□□ -1.88
SRP54-207ENST00000555535 ARL13BQ3SXY8 428 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 ARL13AQ5H913 290 aaPredicted RBP3.29□□□□□ -1.88
SRP54-207ENST00000555535 HIBCHQ6NVY1 386 aaPredicted RBP3.29□□□□□ -1.88
SRP54-207ENST00000555535 ADPRHL1Q8NDY3 354 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 FEM1CQ96JP0 617 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 TBCBQ99426 244 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 B3GNT4Q9C0J1 378 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 SLC12A4Q9UP95 1085 aa3.29□□□□□ -1.88
SRP54-207ENST00000555535 CYP3A7-CYP3A51PA0A087WV96 503 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms