RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 DEFB132Q7Z7B7 95 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 KCNK16Q96T55 309 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 TLK1Q9UKI8 766 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 COL11A1P12107 1806 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 SAC3D1A6NKF1 404 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 G3V2L1 256 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 AURKAO14965 403 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 FBXO21O94952 628 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 STT3AP46977 705 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 SEPT6Q14141 434 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 CHST15Q7LFX5 561 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 RYBPQ8N488 228 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 RNF139Q8WU17 664 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 ILKAPQ9H0C8 392 aaPredicted RBP17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 NXF3Q9H4D5 531 aaKnown RBP17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 ZNF711Q9Y462 761 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 PABPC4LP0CB38 370 aaKnown RBP17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 PGAM1P18669 254 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 TKTP29401 623 aaKnown RBP17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 SNAPC2Q13487 334 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 SEL1L3Q68CR1 1132 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 IFNEQ86WN2 208 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 RHOBTB2Q9BYZ6 727 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 C1orf21Q9H246 121 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 ELP3Q9H9T3 547 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 AURKCQ9UQB9 309 aa17.38■□□□□ 0.37
PPP4R3A-208ENST00000555462 TTC24A2A3L6 582 aaPredicted RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 PDLIM1O00151 329 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 MAGEA3P43357 314 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 MPP3Q13368 585 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 SEMA5AQ13591 1074 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 SH2D4BQ5SQS7 431 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 RARS2Q5T160 578 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 EPGNQ6UW88 154 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 LCA5Q86VQ0 697 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 CXorf38Q8TB03 319 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 SLC35F5Q8WV83 523 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 NXNL1Q96CM4 212 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 VPS39Q96JC1 886 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 QKIQ96PU8 341 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■□□□ 12.8
PPP4R3A-208ENST00000555462 ZNF670Q9BS34 389 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 SPATC1LQ9H0A9 340 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 SOX17Q9H6I2 414 aaPredicted RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 NOL11Q9H8H0 719 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 COQ10BQ9H8M1 238 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 HSFX1Q9UBD0 423 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 ZNF638Q14966 1978 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 MKI67P46013 3256 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 IGKV6D-21A0A0A0MT36 114 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 VAPBO95292 243 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 STAMBPO95630 424 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 ASLP04424 464 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 PCSK7Q16549 785 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 KCTD21Q4G0X4 260 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 PAN2Q504Q3 1202 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 FSCBQ5H9T9 825 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 RWDD4Q6NW29 188 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 AAGABQ6PD74 315 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 KCNMB4Q86W47 210 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 MED10Q9BTT4 135 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 RNF39Q9H2S5 420 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 FBRSL1Q9HCM7 1045 aaKnown RBP17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 XPR1Q9UBH6 696 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 COMMD3-BMI1R4GMX3 469 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 USP34Q70CQ2 3546 aa17.37■□□□□ 0.37
PPP4R3A-208ENST00000555462 SPTLC1O15269 473 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 TIPRLO75663 272 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 TSHRP16473 764 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 DESP17661 470 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 NFKB1P19838 968 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 PROZP22891 400 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 CES1P23141 567 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 PDAP1Q13442 181 aaKnown RBP17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 ITPRIPL1Q6GPH6 555 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 PIGZQ86VD9 579 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 IPMKQ8NFU5 416 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 SLC29A1Q99808 456 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 CCT7Q99832 543 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 FERMT1Q9BQL6 677 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 TRPC7Q9HCX4 862 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 SLC2A6Q9UGQ3 507 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 EGFL7Q9UHF1 273 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 PSMD13Q9UNM6 376 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 TNFSF13BQ9Y275 285 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 PTGDR2Q9Y5Y4 395 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 CDY2AQ9Y6F7 541 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 CDY1Q9Y6F8 540 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 SHROOM3Q8TF72 1996 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 MAP3K7CLP57077 242 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 DCAF15Q66K64 600 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 ARHGAP36Q6ZRI8 547 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 OSMRQ99650 979 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 C2orf40Q9H1Z8 148 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 TNFRSF12AQ9NP84 129 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 BFARQ9NZS9 450 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 C7orf72A4D263 438 aa17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 EEF2KO00418 725 aaKnown RBP17.36■□□□□ 0.37
PPP4R3A-208ENST00000555462 GRK2P25098 689 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms