RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 RHBDF2Q6PJF5 856 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 YTHDF3Q7Z739 585 aaKnown RBP11.47□□□□□ -0.57
SHMT2-216ENST00000554975 PCGF5Q86SE9 256 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 MON1AQ86VX9 555 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 NLRP14Q86W24 1093 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 MARCH9Q86YJ5 346 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 HDDC3Q8N4P3 179 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 HPDLQ96IR7 371 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 MCEEQ96PE7 176 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 XYLT2Q9H1B5 865 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 SYNCQ9H7C4 482 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 CAPN10Q9HC96 672 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 TMLHEQ9NVH6 421 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 SIX4Q9UIU6 781 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 ANAPC5Q9UJX4 755 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 KNTC1P50748 2209 aa11.47□□□□□ -0.57
SHMT2-216ENST00000554975 TMEM131Q92545 1883 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 MUC22E2RYF6 1773 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 MYO18BQ8IUG5 2567 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 TCRBV5S1A1TA0A578 114 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 EIF4E1BA6NMX2 242 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 MYO1CO00159 1063 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 TULP2O00295 520 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 MAP3K13O43283 966 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 OPHN1O60890 802 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 TCEA3O75764 348 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 CD58P19256 250 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 FLT3P36888 993 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 ADCY8P40145 1251 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 STAT4Q14765 748 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 TRIP6Q15654 476 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 TAF12Q16514 161 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 TFDP3Q5H9I0 405 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 SCARA3Q6AZY7 606 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 SCARA5Q6ZMJ2 495 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 SPOCD1Q6ZMY3 1216 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 GSTA5Q7RTV2 222 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 SLCO6A1Q86UG4 719 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 DCP1BQ8IZD4 617 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 ADGRF2Q8IZF7 708 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 ALLCQ8N6M5 410 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 TXNDC5Q8NBS9 432 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 OR2W6PQ8NHA6 318 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 MYCBPAPQ8TBZ2 947 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 ZNF473Q8WTR7 871 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 C1orf54Q8WWF1 131 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 ATP2A3Q93084 1043 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 SLITRK1Q96PX8 696 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 RASSF4Q9H2L5 321 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 CDC42EP4Q9H3Q1 356 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 PCDH9Q9HC56 1237 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 DDX43Q9NXZ2 648 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 ABI2Q9NYB9 513 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 SLC6A14Q9UN76 642 aa11.46□□□□□ -0.57
SHMT2-216ENST00000554975 MAGED2Q9UNF1 606 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 DRG1Q9Y295 367 aaKnown RBP11.46□□□□□ -0.57
SHMT2-216ENST00000554975 A0A087WUV0 522 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 TCRBV7S2A1N4TA0A589 114 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 GMNCA6NCL1 334 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 SIGLEC16A6NMB1 481 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 E7EVH7 732 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 DNALI1O14645 258 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 LIASO43766 372 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 CILPO75339 1184 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 GJB3O75712 270 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 ZNF189O75820 626 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 RNF8O76064 485 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 KLF8O95600 359 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 ITGAVP06756 1048 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 SERPINF2P08697 491 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 ACAT1P24752 427 aaKnown RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 PSMA2P25787 234 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 DDX6P26196 483 aaKnown RBP eCLIP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 GJC1P36383 396 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 MMP13P45452 471 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 IFNAR2P48551 515 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 ATXN3P54252 364 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 TAS2R40P59535 323 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 ZXDBP98169 803 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 GUCY1A3Q02108 690 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 INCA1Q0VD86 236 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 MORF4L2Q15014 288 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 DUOXA1Q1HG43 343 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 PPP1R15BQ5SWA1 713 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 IZUMO3Q5VZ72 239 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 CCDC25Q86WR0 208 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 VSIG1Q86XK7 387 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 CNPY4Q8N129 248 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 TMEM86AQ8N2M4 240 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 IL17RCQ8NAC3 791 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 MRPS31Q92665 395 aaKnown RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 CFAP57Q96MR6 1250 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 EPB41L4BQ9H329 900 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 CCDC134Q9H6E4 229 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 TRPC7Q9HCX4 862 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 SCUBE2Q9NQ36 999 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 GDAP2Q9NXN4 497 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 SENP1Q9P0U3 644 aa11.45□□□□□ -0.58
SHMT2-216ENST00000554975 CHORDC1Q9UHD1 332 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-216ENST00000554975 ZMYM5Q9UJ78 669 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms