RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 RMDN1Q96DB5 314 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 RILPQ96NA2 401 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 CYLDQ9NQC7 956 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 ZFP69BQ9UJL9 534 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 A0A0A0MRY4 1105 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 TCRBV7S3A2A0A539 114 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 FAM47DPA6NHR8 397 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 PSMD7P51665 324 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 FNBP1LQ5T0N5 605 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 SPATA13Q96N96 652 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 PALMDQ9NP74 551 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 TLK1Q9UKI8 766 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 FZD10Q9ULW2 581 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 PCDHB12Q9Y5F1 795 aa16.9■□□□□ 0.3
PCNX1-209ENST00000554879 SDR42E2A6NKP2 422 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 GOLGA8TH3BQL2 631 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 MTSS1O43312 755 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 OR1E1P30953 314 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 CCR3P51677 355 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 TBL3Q12788 808 aaKnown RBP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 LACTB2Q53H82 288 aaPredicted RBP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 LRRC4CQ9HCJ2 640 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 ENTPD7Q9NQZ7 604 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 C20orf96Q9NUD7 363 aaPredicted RBP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 OR6C75A6NL08 312 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 CST5P28325 142 aaPredicted RBP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 SLC11A2P49281 568 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 TUFMP49411 452 aaKnown RBP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 LGI2Q8N0V4 545 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 DPYSL4O14531 572 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 NDUFB5O43674 189 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 LRG1P02750 347 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 POLBP06746 335 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 RIPK1Q13546 671 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 EFTUD2Q15029 972 aaKnown RBP eCLIP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 OASLQ15646 514 aaKnown RBP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 RNASEH2BQ5TBB1 312 aaKnown RBP16.89■□□□□ 0.29
PCNX1-209ENST00000554879 LRRC8BQ6P9F7 803 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 GSTCDQ8NEC7 633 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 CATSPER2Q96P56 530 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 AAASQ9NRG9 546 aa16.89■□□□□ 0.29
PCNX1-209ENST00000554879 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.88■□□□□ 0.29
PCNX1-209ENST00000554879 SPECC1L-ADORA2AF8WAN1 911 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 ECHS1P30084 290 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 POU6F1Q14863 301 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 DPYSL2Q16555 572 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 ANO4Q32M45 955 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 MRPL10Q7Z7H8 261 aaKnown RBP16.88■□□□□ 0.29
PCNX1-209ENST00000554879 PHC3Q8NDX5 983 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 NKX1-2Q9UD57 310 aaPredicted RBP16.88■□□□□ 0.29
PCNX1-209ENST00000554879 ANGPTL2Q9UKU9 493 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 PLXNB2O15031 1838 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 TMEM63AO94886 807 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 NUDT17P0C025 328 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 CPA2P48052 419 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 GEN1Q17RS7 908 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 VSTM1Q6UX27 236 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 C4orf22Q6V702 233 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 AGGF1Q8N302 714 aaeCLIP16.88■□□□□ 0.29
PCNX1-209ENST00000554879 OR52K1Q8NGK4 314 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 NME7Q9Y5B8 376 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 NFKBIAP25963 317 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 TMPRSS15P98073 1019 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 KIAA0319Q5VV43 1072 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 CFAP52Q8N1V2 620 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 RBBP6Q7Z6E9 1792 aaKnown RBP16.88■□□□□ 0.29
PCNX1-209ENST00000554879 CBX6O95503 412 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 ACADSP16219 412 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 C6orf183Q5T699 404 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 APLFQ8IW19 511 aaPredicted RBP16.88■□□□□ 0.29
PCNX1-209ENST00000554879 PQLC3Q8N755 202 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 CXorf38Q8TB03 319 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 SPPL2BQ8TCT7 592 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 APBB2Q92870 758 aa16.88■□□□□ 0.29
PCNX1-209ENST00000554879 NFKB1P19838 968 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 ABCG1P45844 678 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 LVRNQ6Q4G3 990 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 FBXO22Q8NEZ5 403 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 KCTD13Q8WZ19 329 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 PGM2Q96G03 612 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 FICDQ9BVA6 458 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 SCN1AP35498 2009 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 NCAM2O15394 837 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 MYL4P12829 197 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 PRAMEP78395 509 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 NAPEPLDQ6IQ20 393 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 C16orf59Q7L2K0 433 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 NDUFAF2Q8N183 169 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 NPY6RQ99463 290 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 NDE1Q9NXR1 346 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 FBXW11Q9UKB1 542 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 SH3GLB1Q9Y371 365 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 PCDHGA4Q9Y5G9 962 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 SYN3O14994 580 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 ATP5C1P36542 298 aaKnown RBP16.87■□□□□ 0.29
PCNX1-209ENST00000554879 EPHB3P54753 998 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 DNAJC3Q13217 504 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 MED21Q13503 144 aa16.87■□□□□ 0.29
PCNX1-209ENST00000554879 UBAP2Q5T6F2 1119 aaKnown RBP16.87■□□□□ 0.29
PCNX1-209ENST00000554879 IZUMO2Q6UXV1 221 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms